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L3_072_000G1_scaffold_676

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_676_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(289..543)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAM3_BIFBI
Putative transposase for insertion sequenceelement IS986/IS6110 {ECO:0000313|EMBL:EKE51050.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative transposase for insertion sequenceelement IS986/IS6110
L3_072_000G1_scaffold_676_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

613..927
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAM4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI84370.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
transposase
L3_072_000G1_scaffold_676_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1349..1693)
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAM6_BIFBI
Truncated transposase {ECO:0000313|EMBL:BAQ97291.1}; Uncharacterized protein {ECO:0000313|EMBL:ERI84369.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
transposase for insertion sequence elementIS1557
L3_072_000G1_scaffold_676_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1899..2306)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFK9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03672.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_072_000G1_scaffold_676_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2643..5096
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Phosphorylase n=4 Tax=Bifidobacterium bifidum RepID=E4VAM8_BIFBI
glgP1; glycogen/starch/alpha-glucan phosphorylase
L3_072_000G1_scaffold_676_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5631..5852)
DNA (222bp) protein (74aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WFL2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51042.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_072_000G1_scaffold_676_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6039..6824
DNA (786bp) protein (262aa)
Peptidase, S54 family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIK2_BIFBI
Membrane spanning protein {ECO:0000313|EMBL:KFI42208.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
membrane spanning protein
L3_072_000G1_scaffold_676_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6922..7557
DNA (636bp) protein (212aa)
Putative transposase for insertion sequenceelement IS1353 n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M3S2_BIFBI
Putative transposase for insertion sequenceelement IS1353 {ECO:0000313|EMBL:EKF15685.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
putative transposase for insertion sequenceelement IS1353
L3_072_000G1_scaffold_676_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7778..9106
DNA (1329bp) protein (443aa)
N6-adenine-specific methylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPK8_BIFBS
N6-adenine-specific methylase
N6-adenine-specific methylase {ECO:0000313|EMBL:ADO52335.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_676_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9232..9672)
DNA (441bp) protein (147aa)
Cell division protein CrgA n=2 Tax=Bifidobacterium RepID=E4VAN3_BIFBI
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_072_000G1_scaffold_676_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9750..10538
DNA (789bp) protein (263aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=K2HX53_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15688.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_000G1_scaffold_676_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10535..11764
DNA (1230bp) protein (410aa)
Sortase family protein n=2 Tax=Bifidobacterium bifidum RepID=K2HAG6_BIFBI
Sortase family protein {ECO:0000313|EMBL:EKE51036.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Sortase family protein
L3_072_000G1_scaffold_676_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11860..12504
DNA (645bp) protein (215aa)
Para-aminobenzoate synthase glutamine amidotransferase component II n=7 Tax=Bifidobacterium bifidum RepID=E3EPL2_BIFBS
pabA; Para-aminobenzoate synthase glutamine amidotransferase component II
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ADO52339.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_676_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12737..14794)
DNA (2058bp) protein (686aa)
PknB Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42215.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42215.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
pknB; putative serine/threonine-protein kinase (EC:2.7.11.1)
Kinase domain protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAN7_BIFBI
L3_072_000G1_scaffold_676_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14797..15780)
DNA (984bp) protein (328aa)
PknA Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42216.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42216.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Serine/threonine protein kinase n=6 Tax=Bifidobacterium RepID=E3EPL4_BIFBS
Serine/threonine protein kinase
L3_072_000G1_scaffold_676_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15777..17243)
DNA (1467bp) protein (489aa)
pbp; penicillin-binding protein Pbp (EC:2.4.1.129)
Cell division protein FtsI/penicillin-binding protein 2 n=2 Tax=Bifidobacterium RepID=R6GQL1_9BIFI
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDB23531.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_676_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17240..18718)
DNA (1479bp) protein (493aa)
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division n=8 Tax=Bifidobacterium RepID=E3EPL6_BIFBS
ftsW; putative cell division protein
FtsW Cell division protein {ECO:0000313|EMBL:KFI42218.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_000G1_scaffold_676_18
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18715..20373)
DNA (1659bp) protein (553aa)
pp2c; protein phosphatase 2C (EC:3.1.3.16)
Pp2c Protein phosphatase 2C n=2 Tax=Bifidobacterium RepID=E4NY67_BIFBP
Pp2c Protein phosphatase 2C {ECO:0000313|EMBL:CDB23528.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_676_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20380..20925)
DNA (546bp) protein (182aa)
FHA domain protein n=7 Tax=Bifidobacterium RepID=E4VAP2_BIFBI
hypothetical protein
FHA domain protein {ECO:0000313|EMBL:EFR49480.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_000G1_scaffold_676_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20953..21654)
DNA (702bp) protein (234aa)
FHA domain containing protein n=8 Tax=Bifidobacterium RepID=E3ELF1_BIFBS
hypothetical protein
FHA domain-containing protein {ECO:0000313|EMBL:EKF14860.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_000G1_scaffold_676_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21895..24426
DNA (2532bp) protein (844aa)
pepX; Xaa-Pro dipeptidase (EC:3.4.14.5)
PepX Xaa-Pro dipeptidyl-peptidase {ECO:0000313|EMBL:KFI42222.1}; EC=3.4.14.5 {ECO:0000313|EMBL:KFI42222.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
PepX Xaa-Pro dipeptidyl-peptidase n=5 Tax=Bifidobacterium RepID=E4NY70_BIFBP
L3_072_000G1_scaffold_676_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24690..27476
DNA (2787bp) protein (929aa)
Pip3 Phage infection protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY71_BIFBP
pip; pip3 phage infection protein
Putative ABC-2 type transporter {ECO:0000313|EMBL:ADO52348.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_676_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27473..29800
DNA (2328bp) protein (776aa)
Pip4 Phage infection protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYE8_BIFBP
pip; pip4 phage infection protein
Presumable ABC-2 type transporter {ECO:0000313|EMBL:ADO52349.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_676_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29959..31008
DNA (1050bp) protein (350aa)
PldB Lysophospholipase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELF5_BIFBS
pldB Lysophospholipase
PldB Lysophospholipase {ECO:0000313|EMBL:ADO52350.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_676_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31044..32018
DNA (975bp) protein (325aa)
Permease n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HU27_BIFBI
Permease {ECO:0000313|EMBL:EKE51023.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
permease
L3_072_000G1_scaffold_676_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32282..33037
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2C1L0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI84344.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_000G1_scaffold_676_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33236..33616
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAQ0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97317.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_000G1_scaffold_676_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33718..34722
DNA (1005bp) protein (335aa)
msrAB; peptide methionine sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase n=4 Tax=Bifidobacterium RepID=I3WFN4_BIFBI
Bifunctional methionine sulfoxide reductase {ECO:0000313|EMBL:BAQ97318.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_072_000G1_scaffold_676_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34727..35227)
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFN5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42229.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_000G1_scaffold_676_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35577..38762)
DNA (3186bp) protein (1062aa)
Putative ATP-dependent helicase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HA14_9BIFI
Putative ATP-dependent helicase {ECO:0000313|EMBL:CDB23027.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative ATP-dependent helicase
Displaying items 1-30 of 41 in total

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