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L3_072_000G1_scaffold_678

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_678_1
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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164..1822
DNA (1659bp) protein (553aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=Lactobacillus salivarius RepID=C2EFB7_9LACO
Formate--tetrahydrofolate ligase {ECO:0000313|EMBL:AKI04331.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_000G1_scaffold_678_2
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1841..2467
DNA (627bp) protein (209aa)
Hypothetical secreted protein n=1 Tax=Lactobacillus salivarius (strain UCC118) RepID=Q1WTV9_LACS1
hypothetical protein
Hypothetical secreted protein {ECO:0000313|EMBL:ABD99653.1}; TaxID=362948 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius (strain UCC118).;"
L3_072_000G1_scaffold_678_3
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2574..3932
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius SMXD51 RepID=H7FY47_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EIA33384.1}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
hypothetical protein
L3_072_000G1_scaffold_678_4
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4124..4723
DNA (600bp) protein (200aa)
Family 2 glycosyl transferase n=1 Tax=Lactobacillus salivarius SMXD51 RepID=H7FY48_9LACO
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIA33385.1}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
LPXTG-motif cell wall anchor domain protein
L3_072_000G1_scaffold_678_5
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4853..7018
DNA (2166bp) protein (722aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Lactobacillus salivarius ACS-116-V-Col5a RepID=E1JQ87_9LACO
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFK78943.1}; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
Peptidase
L3_072_000G1_scaffold_678_6
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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7058..7441
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus salivarius NIAS840 RepID=F5VFF9_9LACO
Peptidase {ECO:0000313|EMBL:AKI04337.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
Peptidase
L3_072_000G1_scaffold_678_7
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7567..7926
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DJD2_9LACO
Uncharacterized protein {ECO:0000313|EMBL:CDK34779.1}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
L3_072_000G1_scaffold_678_8
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8296..9645
DNA (1350bp) protein (450aa)
Transporter, major facilitator family protein n=2 Tax=Lactobacillus salivarius RepID=C2EFC4_9LACO
Permeases of the major facilitator superfamily
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEJ74677.1}; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
L3_072_000G1_scaffold_678_9
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9778..10476
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius (strain UCC118) RepID=Q1WTV6_LACS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD99656.1}; TaxID=362948 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius (strain UCC118).;"
L3_072_000G1_scaffold_678_10
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10469..11281
DNA (813bp) protein (271aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Lactobacillus salivarius RepID=F5VFG3_9LACO
NIF3-like protein
L3_072_000G1_scaffold_678_11
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11300..12541
DNA (1242bp) protein (414aa)
pepD; Peptidase T (EC:3.4.11.14)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=768728 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius ACS-116-V-Col5a.;"
Peptidase T n=5 Tax=Lactobacillus salivarius RepID=C2EFC7_9LACO
L3_072_000G1_scaffold_678_12
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12597..13253
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Lactobacillus salivarius RepID=D8IL28_LACSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK34784.1}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
L3_072_000G1_scaffold_678_13
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13354..14286
DNA (933bp) protein (311aa)
Transporter, drug/metabolite exporter family n=4 Tax=Lactobacillus salivarius RepID=D8IL29_LACSC
Transporter, drug/metabolite exporter family
Transporter, drug/metabolite exporter family {ECO:0000313|EMBL:AIR10551.1}; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
L3_072_000G1_scaffold_678_14
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14368..15624
DNA (1257bp) protein (419aa)
Tetratricopeptide repeat family protein n=3 Tax=Lactobacillus salivarius RepID=Q1WTV1_LACS1
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABD99661.1}; TaxID=362948 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius (strain UCC118).;"
L3_072_000G1_scaffold_678_15
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


16007..17302
DNA (1296bp) protein (432aa)
hisS; Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
Histidyl-tRNA synthetase n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DL94_9LACO
L3_072_000G1_scaffold_678_16
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


17305..19077
DNA (1773bp) protein (591aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EEJ74685.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EEJ74685.1};; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
aspS; Aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EFD2_9LACO
L3_072_000G1_scaffold_678_17
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19209..20126
DNA (918bp) protein (306aa)
Magnesium and cobalt transport protein corA n=1 Tax=Lactobacillus salivarius (strain CECT 5713) RepID=D8IL33_LACSC
corA; Magnesium and cobalt transport protein corA
Magnesium and cobalt transport protein corA {ECO:0000313|EMBL:AKI04347.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
L3_072_000G1_scaffold_678_18
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20486..21853
DNA (1368bp) protein (456aa)
Predicted tyrosine transporter, NhaC family n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DMB6_9LACO
nhaC; Na(+)/H(+) antiporter
Na(+)/H(+) antiporter {ECO:0000313|EMBL:AIR10556.1}; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
L3_072_000G1_scaffold_678_19
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21987..22964
DNA (978bp) protein (326aa)
dapF; Diaminopimelate epimerase (DAP epimerase) (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
Diaminopimelate epimerase n=4 Tax=Lactobacillus salivarius RepID=D8IL35_LACSC
L3_072_000G1_scaffold_678_20
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22976..23512
DNA (537bp) protein (179aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AIR10558.1}; EC=3.6.1.13 {ECO:0000313|EMBL:AIR10558.1};; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
ADP-ribose pyrophosphatase n=5 Tax=Lactobacillus salivarius RepID=D8IL36_LACSC
L3_072_000G1_scaffold_678_21
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23522..23743
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DJE8_9LACO
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIR10559.1}; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
L3_072_000G1_scaffold_678_22
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23764..24450
DNA (687bp) protein (229aa)
pfs; 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase (EC:3.2.2.16 3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {ECO:0000256|HAMAP-Rule:MF_01684};; EC=3.2.2.9 {ECO:0000256|HAMAP-Rule:MF_01684};; 5'-methylthioadenosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DJA5_9LACO
L3_072_000G1_scaffold_678_23
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24505..25608
DNA (1104bp) protein (368aa)
nifS; cysteine desulfurase / selenocysteine lyase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase / selenocysteine lyase n=1 Tax=Lactobacillus salivarius SMXD51 RepID=H7FY66_9LACO
Cysteine desulfurase / selenocysteine lyase {ECO:0000313|EMBL:EIA33403.1}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
L3_072_000G1_scaffold_678_24
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25621..25962
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Lactobacillus salivarius RepID=Q1WTT8_LACS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGL99523.1}; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
L3_072_000G1_scaffold_678_25
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26075..27202
DNA (1128bp) protein (376aa)
tRNA-specific 2-thiouridylase mnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
tRNA-specific 2-thiouridylase MnmA n=4 Tax=Lactobacillus salivarius RepID=D8IL39_LACSC
L3_072_000G1_scaffold_678_26
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27327..29918
DNA (2592bp) protein (864aa)
Chaperone n=1 Tax=Lactobacillus salivarius SMXD51 RepID=H7FY69_9LACO
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1108963 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius SMXD51.;"
clpB; ClpB protein
L3_072_000G1_scaffold_678_27
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29968..30153)
DNA (186bp) protein (62aa)
Uncharacterized protein n=7 Tax=Lactobacillus salivarius RepID=C2EFE3_9LACO
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EEJ74696.1}; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;"
L3_072_000G1_scaffold_678_28
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30302..33595
DNA (3294bp) protein (1098aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
DNA polymerase III alpha subunit n=1 Tax=Lactobacillus salivarius cp400 RepID=V6DMC6_9LACO
L3_072_000G1_scaffold_678_29
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33762..34724
DNA (963bp) protein (321aa)
pfkA; 6-phosphofructokinase (Phosphofructokinase) (Phosphohexokinase) (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1273133 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius cp400.;"
6-phosphofructokinase n=5 Tax=Lactobacillus salivarius RepID=K6PF_LACS1
L3_072_000G1_scaffold_678_30
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34814..36574
DNA (1761bp) protein (587aa)
pykF; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1041521 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius GJ-24.;"
Pyruvate kinase n=5 Tax=Lactobacillus salivarius RepID=Q1WTT2_LACS1
Displaying 30 items

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