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L3_072_000G1_scaffold_679

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_679_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

293..1564
DNA (1272bp) protein (424aa)
Phage integrase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6S3_9BIFI
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:AII76687.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_072_000G1_scaffold_679_2
unknown

Not on your lists

1796..1963
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000G1_scaffold_679_3
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1967..2857
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EC08_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH40464.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
L3_072_000G1_scaffold_679_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2960..3388
DNA (429bp) protein (143aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30468.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_072_000G1_scaffold_679_5
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3805..4161)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXU8_9BIFI
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20609.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_072_000G1_scaffold_679_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4205..4567)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXU8_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30472.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
DNA-binding protein
L3_072_000G1_scaffold_679_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4670..4936
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GT98_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI90294.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L3_072_000G1_scaffold_679_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4970..5269
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H776_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98179.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_072_000G1_scaffold_679_9
unknown

Not on your lists

5312..5632
DNA (321bp) protein (107aa)

This feature has no annotations

L3_072_000G1_scaffold_679_10
unknown

Not on your lists

5629..5796
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000G1_scaffold_679_11
unknown

Not on your lists

5793..5990
DNA (198bp) protein (66aa)

This feature has no annotations

L3_072_000G1_scaffold_679_12
unknown

Not on your lists

5987..6190
DNA (204bp) protein (68aa)

This feature has no annotations

L3_072_000G1_scaffold_679_13
unknown

Not on your lists

6589..7293
DNA (705bp) protein (235aa)

This feature has no annotations

L3_072_000G1_scaffold_679_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7293..7847
DNA (555bp) protein (185aa)
Single-stranded DNA-binding protein n=2 Tax=Bifidobacterium dentium RepID=D2Q6Q0_BIFDB
single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_072_000G1_scaffold_679_15
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7847..8263
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5C0_BIFAD
Gp53 family protein {ECO:0000313|EMBL:KFI96041.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_072_000G1_scaffold_679_16
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8260..9240
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTW7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20618.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_072_000G1_scaffold_679_17
unknown

Not on your lists

9237..9506
DNA (270bp) protein (90aa)

This feature has no annotations

L3_072_000G1_scaffold_679_18
unknown

Not on your lists

9503..9907
DNA (405bp) protein (135aa)

This feature has no annotations

L3_072_000G1_scaffold_679_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9904..10158
DNA (255bp) protein (85aa)
Transcriptional regulator WhiB n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A714_BIFAD
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
transcription factor WhiB
L3_072_000G1_scaffold_679_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10155..10463
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5C8_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN84111.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_072_000G1_scaffold_679_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10591..11067
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXB1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98195.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_072_000G1_scaffold_679_22
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11064..11456
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:ETY72229.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L3_072_000G1_scaffold_679_23
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11479..12030
DNA (552bp) protein (184aa)
Phage transcriptional regulator AlpA {ECO:0000313|EMBL:ETY72228.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
Hypothetical protein
L3_072_000G1_scaffold_679_24
unknown

Not on your lists

12027..12470
DNA (444bp) protein (148aa)

This feature has no annotations

L3_072_000G1_scaffold_679_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12674..13237
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UGX2_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06553.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_072_000G1_scaffold_679_26
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13234..14007
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B3DTZ8_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI50037.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
L3_072_000G1_scaffold_679_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14004..14510
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MTC0_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71014.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_072_000G1_scaffold_679_28
unknown

Not on your lists

14866..15102
DNA (237bp) protein (79aa)

This feature has no annotations

L3_072_000G1_scaffold_679_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15190..15528
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5C3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN84106.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
phage methyltransferase
L3_072_000G1_scaffold_679_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15643..16530
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H712_9BIFI
PhnA protein
PhnA protein {ECO:0000313|EMBL:AII76661.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 54 in total

View Taxonomy