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L3_072_000G1_scaffold_682

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_682_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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85..1272
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00036B57DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08373.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_072_000G1_scaffold_682_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1404..2300)
DNA (897bp) protein (299aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
psd; phosphatidylserine decarboxylase proenzyme Psd (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TXP2_9CLOT
L3_072_000G1_scaffold_682_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2541..4265
DNA (1725bp) protein (575aa)
iron hydrogenase 1 (EC:1.12.7.2)
Iron hydrogenase 1 {ECO:0000313|EMBL:AGX41107.1}; EC=1.12.7.2 {ECO:0000313|EMBL:AGX41107.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Iron hydrogenase 1 n=2 Tax=Clostridium saccharobutylicum RepID=U5MNU9_CLOSA
L3_072_000G1_scaffold_682_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4409..5197
DNA (789bp) protein (263aa)
Haloacid dehalogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSY1_CLOPA
Haloacid dehalogenase {ECO:0000313|EMBL:ETD67409.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
HAD family hydrolase
L3_072_000G1_scaffold_682_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5248..6837)
DNA (1590bp) protein (530aa)
Heme ABC transporter ATP-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FUL3_CLOPA
ABC transporter related {ECO:0000313|EMBL:AJG96716.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
ABC transporter ATP-binding protein
L3_072_000G1_scaffold_682_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7449..9152)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R214_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52540.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_072_000G1_scaffold_682_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9152..9745)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPD2_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32212.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_000G1_scaffold_682_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9976..10623
DNA (648bp) protein (216aa)
hemolysin n=1 Tax=Clostridium beijerinckii RepID=UPI0002FCFE3D
hemolysin III family channel protein
Channel protein, hemolysin III family {ECO:0000313|EMBL:ABR32213.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_072_000G1_scaffold_682_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10703..12061)
DNA (1359bp) protein (453aa)
Membrane protein n=4 Tax=Clostridium butyricum RepID=B1R211_CLOBU
Membrane protein {ECO:0000313|EMBL:EEP52542.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
membrane protein
L3_072_000G1_scaffold_682_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12317..13135
DNA (819bp) protein (273aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F290_9CLOT
L3_072_000G1_scaffold_682_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13172..14416
DNA (1245bp) protein (415aa)
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKQ4_CLOSA
L3_072_000G1_scaffold_682_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14592..14849
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AC18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84301.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_072_000G1_scaffold_682_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15322..16371
DNA (1050bp) protein (350aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBP8_9CLOT
L3_072_000G1_scaffold_682_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16384..19596
DNA (3213bp) protein (1071aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
UPI0003D5EF44 related cluster n=1 Tax=unknown RepID=UPI0003D5EF44
L3_072_000G1_scaffold_682_15
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19811..20362
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WBP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00275.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
L3_072_000G1_scaffold_682_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20493..21179
DNA (687bp) protein (229aa)
UPI0003D5CFA7 related cluster n=1 Tax=unknown RepID=UPI0003D5CFA7
Uncharacterized protein {ECO:0000313|EMBL:ETI91448.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_072_000G1_scaffold_682_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21337..21573
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R204_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52508.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_072_000G1_scaffold_682_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21623..22732)
DNA (1110bp) protein (370aa)
rpfG1; cyclic di-GMP phosphodiesterase response regulator RpfG (EC:3.1.4.52)
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:AGX41120.1}; EC=3.1.4.52 {ECO:0000313|EMBL:AGX41120.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cyclic di-GMP phosphodiesterase response regulator RpfG n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKI2_CLOSA
L3_072_000G1_scaffold_682_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22844..24844)
DNA (2001bp) protein (667aa)
Glutamine synthetase, clostridia type {ECO:0000313|EMBL:KJZ84651.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KJZ84651.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GlnA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFS8_CLOBU
glutamine synthetase
L3_072_000G1_scaffold_682_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25039..25815
DNA (777bp) protein (259aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
murI; glutamate racemase MurI (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TL74_9CLOT
L3_072_000G1_scaffold_682_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25899..26423
DNA (525bp) protein (175aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
rotA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXD1_9CLOT
L3_072_000G1_scaffold_682_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26582..26953
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKR4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41123.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_682_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26957..27628
DNA (672bp) protein (224aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJY8_CLOSA
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AGX41124.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_682_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27761..31468
DNA (3708bp) protein (1236aa)
Peptidase, family S8 and S53 {ECO:0000313|EMBL:EES49155.1}; EC=3.4.21.- {ECO:0000313|EMBL:EES49155.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Peptidase, family S8 and S53 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV85_CLOBO
subtilisin like protease
L3_072_000G1_scaffold_682_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31529..32851
DNA (1323bp) protein (441aa)
UPI0003D680D0 related cluster n=1 Tax=unknown RepID=UPI0003D680D0
Spore cortex-lytic enzyme pre-pro-form {ECO:0000313|EMBL:ETI91770.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
spore cortex-lytic protein
L3_072_000G1_scaffold_682_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32962..33867)
DNA (906bp) protein (302aa)
Iron-sulfur protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSW6_CLOPA
Iron-sulfur protein {ECO:0000313|EMBL:ETD67394.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
radical SAM domain containing protein
L3_072_000G1_scaffold_682_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33965..35047)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNW9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41127.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_682_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35291..36217
DNA (927bp) protein (309aa)
Radical SAM protein, family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFR9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD15127.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
radical SAM protein
Displaying 28 items

View Taxonomy