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L3_072_000G1_scaffold_686

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_686_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..1010
DNA (1008bp) protein (336aa)
von Willebrand factor type A domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ2_9BIFI
von Willebrand factor type A domain protein {ECO:0000313|EMBL:ETO96503.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_686_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1015..2595
DNA (1581bp) protein (527aa)
von Willebrand factor type A domain protein n=2 Tax=Bifidobacterium dentium RepID=B1SA43_9BIFI
Cna protein B-type domain protein {ECO:0000313|EMBL:ETO96501.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_686_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2744..4348
DNA (1605bp) protein (535aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ3_9BIFI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFM40341.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
fimbrial subunit
L3_072_000G1_scaffold_686_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4808..5332
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96516.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_686_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5353..6174
DNA (822bp) protein (274aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:5.3.3.10)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q6M9_BIFDB
FAH family protein {ECO:0000313|EMBL:ETO96499.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_686_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6445..9081
DNA (2637bp) protein (879aa)
clpB; ATP-dependent chaperone ClpB (EC:3.6.4.3)
ATP-dependent chaperone protein ClpB n=2 Tax=Bifidobacterium dentium RepID=E0QAJ7_9BIFI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_686_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9168..10175)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40346.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
actP; actP copper transport ATPase
L3_072_000G1_scaffold_686_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10333..11676
DNA (1344bp) protein (448aa)
RmuC domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ9_9BIFI
RmuC domain protein {ECO:0000313|EMBL:EFM40347.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DNA recombination protein rmuC-like protein
L3_072_000G1_scaffold_686_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11702..12364
DNA (663bp) protein (221aa)
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase PyrE n=2 Tax=Bifidobacterium dentium RepID=D2Q6M5_BIFDB
Orotate phosphoribosyltransferase family protein {ECO:0000313|EMBL:ETO96517.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_686_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12453..13415
DNA (963bp) protein (321aa)
tRNA/rRNA methyltransferase (EC:2.1.1.34)
RNA methyltransferase, TrmH family n=2 Tax=Bifidobacterium dentium RepID=E0QAK1_9BIFI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ETO96527.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_686_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13457..14332)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAK2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40350.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_072_000G1_scaffold_686_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14883..15179
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=3 Tax=Bifidobacterium dentium RepID=B1SAA8_9BIFI
glutamyl-tRNA amidotransferase
L3_072_000G1_scaffold_686_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15181..16716
DNA (1536bp) protein (512aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gatA; aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Bifidobacterium dentium RepID=E0QAK4_9BIFI
L3_072_000G1_scaffold_686_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16742..18238
DNA (1497bp) protein (499aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gatB; aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.1.1.18)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Bifidobacterium dentium RepID=E0QAK5_9BIFI
L3_072_000G1_scaffold_686_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18482..19555
DNA (1074bp) protein (358aa)
acetyltransferase (EC:2.3.1.57)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAK6_9BIFI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFM40354.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_072_000G1_scaffold_686_16
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19555..19869
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=E1NAF4_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETY72359.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L3_072_000G1_scaffold_686_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20037..21926
DNA (1890bp) protein (630aa)
Histidine acid phosphatase n=2 Tax=Bifidobacterium dentium RepID=E0QAK8_9BIFI
Histidine phosphatase superfamily (Branch 2) {ECO:0000313|EMBL:ETO96507.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_686_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22130..23719
DNA (1590bp) protein (530aa)
Flavin containing amine oxidoreductase n=4 Tax=Bifidobacterium dentium RepID=D2Q6L6_BIFDB
NAD(P)-binding Rossmann-like domain protein {ECO:0000313|EMBL:ETO96500.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
flavin containing amine oxidoreductase
L3_072_000G1_scaffold_686_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23980..26001
DNA (2022bp) protein (674aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Transcription termination factor Rho n=3 Tax=Bifidobacterium dentium RepID=E0QAL0_9BIFI
rho; transcription termination factor Rho
L3_072_000G1_scaffold_686_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26434..26910
DNA (477bp) protein (159aa)
Transcriptional regulator, AsnC family n=2 Tax=Bifidobacterium dentium RepID=D2Q6L4_BIFDB
AsnC family transcriptional regulator
Winged helix-turn-helix DNA-binding protein {ECO:0000313|EMBL:ETO96525.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_686_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26927..27340
DNA (414bp) protein (138aa)
tyrA; chorismate mutase TyrA (EC:5.4.99.5)
Chorismate mutase {ECO:0000313|EMBL:EFM40360.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EFM40360.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Chorismate mutase TyrA n=4 Tax=Bifidobacterium dentium RepID=D2Q6L3_BIFDB
L3_072_000G1_scaffold_686_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27442..29505
DNA (2064bp) protein (688aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=E0QAL3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96519.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_072_000G1_scaffold_686_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29563..32352)
DNA (2790bp) protein (930aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAL4_9BIFI
L3_072_000G1_scaffold_686_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32434..33978)
DNA (1545bp) protein (515aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Bifidobacterium dentium RepID=E0QAL5_9BIFI
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ETO96514.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
peptides ABC transporter substrate-binding protein
L3_072_000G1_scaffold_686_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34031..34660)
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=2 Tax=Bifidobacterium dentium RepID=D2Q6K8_BIFDB
L3_072_000G1_scaffold_686_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34745..35488)
DNA (744bp) protein (248aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAL7_9BIFI
response regulator-like transcriptional regulatory protein
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:ETO96533.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_072_000G1_scaffold_686_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35657..36418
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAC4_9BIFI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ETO96515.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 27 items

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