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L3_072_000G1_scaffold_690

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_690_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

253..648
DNA (396bp) protein (132aa)
Conserved integral membrane protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TI86_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73741.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

665..1396
DNA (732bp) protein (244aa)
DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=7 Tax=Lactobacillus rhamnosus RepID=B5QKJ3_LACRH
phoP3; two-component response regulator
DNA-binding response regulator, OmpR family {ECO:0000313|EMBL:EKS51735.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_690_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1393..2934
DNA (1542bp) protein (514aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Lactobacillus rhamnosus RepID=C2JW26_LACRH
Two-component system histidine kinase
L3_072_000G1_scaffold_690_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3084..3617
DNA (534bp) protein (178aa)
Acetyltransferase n=5 Tax=Lactobacillus rhamnosus RepID=C7TI89_LACRL
acetyltransferase family protein
Putative acetyltransferase {ECO:0000313|EMBL:AGP73744.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3691..3885)
DNA (195bp) protein (65aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TBA8_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73745.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4319..4753
DNA (435bp) protein (145aa)
UPF0735 ACT domain-containing protein LRH_05659 n=11 Tax=Lactobacillus rhamnosus RepID=B5QKJ7_LACRH
hypothetical protein
UPF0735 ACT domain-containing protein LRHMDP2_1521 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_690_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4778..5281
DNA (504bp) protein (168aa)
Conserved protein n=10 Tax=Lactobacillus rhamnosus RepID=C7TBB0_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51740.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_690_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5472..5819)
DNA (348bp) protein (116aa)
Uncharacterized protein n=8 Tax=Lactobacillus rhamnosus RepID=C8USY9_LACRG
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80776.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_690_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5797..7104)
DNA (1308bp) protein (436aa)
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EEN80777.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEN80777.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ImpB/MucB/SamB family protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TI94_LACRL
impB/mucB/samB family protein
L3_072_000G1_scaffold_690_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7254..7436)
DNA (183bp) protein (61aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TI95_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73750.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7898..8719)
DNA (822bp) protein (274aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TI96_LACRL
membrane protein
Membrane protein {ECO:0000313|EMBL:KIC97708.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_690_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8723..9505)
DNA (783bp) protein (261aa)
Lysophospholipase L1 related esterase n=3 Tax=Lactobacillus rhamnosus RepID=C7TI97_LACRL
GDSL-like Lipase/Acylhydrolase family protein
Lysophospholipase L1 related esterase {ECO:0000313|EMBL:AGP73752.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9556..9876)
DNA (321bp) protein (107aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TI98_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80782.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_690_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10171..12423
DNA (2253bp) protein (751aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
ATP-dependent DNA helicase PcrA n=5 Tax=Lactobacillus rhamnosus RepID=C7TI99_LACRL
pcrA; ATP-dependent DNA helicase PcrA
L3_072_000G1_scaffold_690_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12471..14495
DNA (2025bp) protein (675aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; DNA ligase; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
DNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=C7TIA0_LACRL
ligA; NAD-dependent DNA ligase
L3_072_000G1_scaffold_690_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14508..15659
DNA (1152bp) protein (384aa)
Uncharacterized protein n=10 Tax=Lactobacillus rhamnosus RepID=C8USZ8_LACRG
lipoprotein, pheromone
Putative pheromone cAM373 lipoprotein CamS {ECO:0000313|EMBL:EKS51750.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_690_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15711..16007
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=10 Tax=Lactobacillus rhamnosus RepID=C7TBC0_LACRG
gatC; aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit C
L3_072_000G1_scaffold_690_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16011..17465
DNA (1455bp) protein (485aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=6 Tax=Lactobacillus rhamnosus RepID=C7TIA3_LACRL
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
L3_072_000G1_scaffold_690_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17467..18897
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Lactobacillus rhamnosus RepID=G7UY44_LACRH
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
L3_072_000G1_scaffold_690_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19109..20143
DNA (1035bp) protein (345aa)
Diacylglycerol kinase n=6 Tax=Lactobacillus rhamnosus RepID=C7TIA5_LACRL
yerQ; putative lipid kinase
Lipid kinase {ECO:0000313|EMBL:KIC97699.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_690_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20145..21506
DNA (1362bp) protein (454aa)
tRNA (Uracil-5-)-methyltransferase n=3 Tax=Lactobacillus rhamnosus RepID=C7TIA6_LACRL
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:AGP73761.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21756..22991
DNA (1236bp) protein (412aa)
Transporter, major facilitator family protein n=2 Tax=Lactobacillus rhamnosus RepID=G6ALW6_LACRH
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEN80792.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Permeases of the major facilitator superfamily
L3_072_000G1_scaffold_690_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23069..23884
DNA (816bp) protein (272aa)
Hydrolase of the HAD superfamily n=3 Tax=Lactobacillus rhamnosus RepID=C7TIA8_LACRL
HAD superfamily hydrolase
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:AGP73763.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23960..24835)
DNA (876bp) protein (292aa)
Polyphosphate:AMP phosphotransferase n=4 Tax=Lactobacillus rhamnosus RepID=C7TIA9_LACRL
murQ; polyphosphate:AMP phosphotransferase
Uncharacterized protein {ECO:0000313|EMBL:AGP73764.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24958..26856
DNA (1899bp) protein (633aa)
Neutral endopeptidase, endopeptidase O n=5 Tax=Lactobacillus rhamnosus RepID=C7TIB0_LACRL
pepO; Neutral endopeptidase, endopeptidase O
Neutral endopeptidase {ECO:0000313|EMBL:AGP73765.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26984..27439)
DNA (456bp) protein (152aa)
Acetyltransferase n=6 Tax=Lactobacillus rhamnosus RepID=C7TIB1_LACRL
acetyltransferase family protein
Acetyltransferase {ECO:0000313|EMBL:KIC97693.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_690_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27819..28691)
DNA (873bp) protein (291aa)
DegV family protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TIB2_LACRL
degV; DegV family protein
DegV family protein {ECO:0000313|EMBL:AGP73767.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28883..29815)
DNA (933bp) protein (311aa)
Membrane protease subunit, stomatin/prohibitin family protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QNF3_LACRH
hypothetical protein
Putative stomatin/prohibitin-family membrane protease subunit YbbK {ECO:0000313|EMBL:AGP73768.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_690_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29857..30051)
DNA (195bp) protein (65aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TIB4_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80799.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_690_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30616..31341
DNA (726bp) protein (242aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) (GH25) n=5 Tax=Lactobacillus rhamnosus RepID=C7TIB6_LACRL
glycosyl hydrolases 25 family protein
Lysozyme, putative {ECO:0000313|EMBL:AGP73771.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 36 in total

View Taxonomy