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L3_072_000G1_scaffold_699

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_699_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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534..1940
DNA (1407bp) protein (469aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CDS84271.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDS84271.1};; Aryl-phospho-beta-D-glucosidase BglC {ECO:0000313|EMBL:CDS84710.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDS84710.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
6-phospho-beta-glucosidase (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglC n=2 Tax=Clostridium difficile RepID=T4PTB7_CLODI
L3_072_000G1_scaffold_699_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1968..2816
DNA (849bp) protein (283aa)
PRD domain protein n=136 Tax=Clostridium difficile RepID=C9XM49_CLODC
transcription antiterminator
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CAJ67653.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3453..4169
DNA (717bp) protein (239aa)
Two-component response regulator n=2 Tax=Clostridium difficile RepID=C9XM50_CLODC
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CBE02769.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4172..5101
DNA (930bp) protein (310aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
two-component sensor histidine kinase (EC:2.7.13.3)
His Kinase A domain protein n=101 Tax=Clostridium difficile RepID=T3WAP6_CLODI
L3_072_000G1_scaffold_699_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5249..6172
DNA (924bp) protein (308aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CCL20938.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL20938.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC-type transport system, multidrug-family ATP-binding protein n=181 Tax=Clostridium difficile RepID=Q18A20_CLOD6
L3_072_000G1_scaffold_699_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6156..6926
DNA (771bp) protein (257aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=G6BUV4_CLODI
lantibiotic ABC transporter permease
Putative lantibiotic ABC transporter, permease protein {ECO:0000313|EMBL:CBE02774.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6936..7718
DNA (783bp) protein (261aa)
ABC-2 transporter family protein n=133 Tax=Clostridium difficile RepID=T3I3I4_CLODC
ABC-type transport system, multidrug-familypermease
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE68652.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_699_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8095..8631
DNA (537bp) protein (179aa)
Rubrerythrin n=199 Tax=Clostridium difficile RepID=C9XM55_CLODC
rbr; rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CCL20941.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_000G1_scaffold_699_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8663..9052
DNA (390bp) protein (130aa)
Transcriptional regulator, Fur family n=170 Tax=Clostridium difficile RepID=G6BUV1_CLODI
oxidative stress regulatory protein
Putative ferric-uptake regulator {ECO:0000313|EMBL:CCL20942.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_000G1_scaffold_699_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9089..9475
DNA (387bp) protein (129aa)
rbo; Rubredoxin oxidoreductase (desulfoferrodoxin) (EC:1.15.1.1)
Desulfoferrodoxin ferrous iron-binding domain protein n=185 Tax=Clostridium difficile RepID=T3I3E8_CLODC
Putative superoxide reductase {ECO:0000313|EMBL:EHJ31148.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_000G1_scaffold_699_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9602..11044
DNA (1443bp) protein (481aa)
Rubredoxin family protein n=156 Tax=Clostridium difficile RepID=T3I8C9_CLODC
putative oxidative stress glutamate synthase
Putative oxidative stress glutamate synthase {ECO:0000313|EMBL:CAJ67662.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11341..12156
DNA (816bp) protein (272aa)
Metallo-beta-lactamase superfamily protein n=47 Tax=Clostridium difficile RepID=T2VH93_CLODI
putative metallo-beta-lactamase superfamilyprotein
Putative metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CAJ67663.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12758..13942
DNA (1185bp) protein (395aa)
Uncharacterized protein n=201 Tax=Clostridium difficile RepID=G6BUU7_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02787.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14319..15446)
DNA (1128bp) protein (376aa)
DEAD/DEAH box helicase n=6 Tax=Clostridium difficile RepID=D5Q162_CLODI
ATP-dependent RNA helicase
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:CCL32930.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_699_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15890..17083
DNA (1194bp) protein (398aa)
aksA; Trans-homoaconitate synthase (EC:2.3.-.-)
Trans-homoaconitate synthase {ECO:0000313|EMBL:CCL00784.1}; EC=2.3.-.- {ECO:0000313|EMBL:CCL00784.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Homocitrate synthase n=201 Tax=Clostridium difficile RepID=T3I3Z9_CLODC
L3_072_000G1_scaffold_699_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17108..19033
DNA (1926bp) protein (642aa)
Aconitate hydratase {ECO:0000313|EMBL:CKH57062.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CKH57062.1};; EC=4.2.1.85 {ECO:0000313|EMBL:CKH57062.1};; Aconitate hydratase (Citrate hydro-lyase) {ECO:0000313|EMBL:CEJ97381.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CEJ97381.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
acnB; Aconitate hydratase (Citrate hydro-lyase) (EC:4.2.1.3)
Aconitase family protein n=113 Tax=Clostridium difficile RepID=T3I2Z0_CLODC
L3_072_000G1_scaffold_699_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19055..20050
DNA (996bp) protein (332aa)
icd; Isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase NAD-dependent {ECO:0000313|EMBL:CCL32933.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CCL32933.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Isocitrate/isopropylmalate dehydrogenase family protein n=188 Tax=Clostridium difficile RepID=T3I7Y2_CLODC
L3_072_000G1_scaffold_699_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20376..20849
DNA (474bp) protein (158aa)
Iron dependent repressor, N-terminal DNA binding domain protein n=16 Tax=Clostridium difficile RepID=T3NBX3_CLODI
MarR family transcriptional regulator
MarR-family transcriptional regulator {ECO:0000313|EMBL:CBE02796.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20883..21377
DNA (495bp) protein (165aa)
Acetyltransferase family protein n=138 Tax=Clostridium difficile RepID=C9XM66_CLODC
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CCL32935.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_699_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21456..21995
DNA (540bp) protein (180aa)
Nitroreductase family protein n=2 Tax=Clostridium difficile RepID=T4PMH2_CLODI
Nitroreductase family protein {ECO:0000313|EMBL:EHJ31408.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
reductase
L3_072_000G1_scaffold_699_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22184..22495
DNA (312bp) protein (104aa)
Uncharacterized protein n=215 Tax=Clostridium difficile RepID=G6B6Z8_CLODI
DNA-binding protein
Putative dNA-binding protein {ECO:0000313|EMBL:EQG78378.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_000G1_scaffold_699_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22568..23209
DNA (642bp) protein (214aa)
CAAX protease self-immunity family protein n=162 Tax=Clostridium difficile RepID=T3I7Y6_CLODC
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL32938.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_699_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23441..24325
DNA (885bp) protein (295aa)
Fumarylacetoacetate (FAA) hydrolase family protein n=24 Tax=Clostridium difficile RepID=T2W2L9_CLODI
hydrolase
Putative isomerase/hydrolase {ECO:0000313|EMBL:CCL32939.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_699_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24424..25599
DNA (1176bp) protein (392aa)
5-aminoimidazole-4-carboxamide ribonucleotide transformylase (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme n=170 Tax=Clostridium difficile RepID=G6B6Z5_CLODI
AICARFT/IMPCHase bienzyme family protein {ECO:0000313|EMBL:EQE68457.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_699_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25727..26581
DNA (855bp) protein (285aa)
Phosphatase 2C family protein n=152 Tax=Clostridium difficile RepID=T3I5T2_CLODC
conserved hypothetical protein
Phosphatase 2C family protein {ECO:0000313|EMBL:EQE68495.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_699_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26625..27860
DNA (1236bp) protein (412aa)
Glycosyl transferases group 1 family protein n=109 Tax=Clostridium difficile RepID=T3I3Z1_CLODC
group 1 glycosyl transferase
Putative glycosyl transferase, group 1 {ECO:0000313|EMBL:CCL20959.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_000G1_scaffold_699_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27961..28902
DNA (942bp) protein (314aa)
Cell surface protein n=179 Tax=Clostridium difficile RepID=C9XM74_CLODC
cell surface protein
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQG78365.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_000G1_scaffold_699_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29121..29474)
DNA (354bp) protein (118aa)
Uncharacterized protein n=110 Tax=Clostridium difficile RepID=G6BUS9_CLODI
nuclease
Putative nuclease {ECO:0000313|EMBL:CCL20961.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_000G1_scaffold_699_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29761..30681
DNA (921bp) protein (307aa)
Uncharacterized protein n=189 Tax=Clostridium difficile RepID=C9XM76_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67680.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_000G1_scaffold_699_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30912..31376
DNA (465bp) protein (155aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BUS7_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE02817.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Displaying items 1-30 of 47 in total

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