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L3_072_000G1_scaffold_704

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_704_1
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
Acetate-CoA ligase {ECO:0000313|EMBL:EGY77100.1}; EC=6.2.1.1 {ECO:0000313|EMBL:EGY77100.1};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
acetate--CoA ligase (EC:6.2.1.1)
Acetate-CoA ligase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D031_9ACTO
L3_072_000G1_scaffold_704_2
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

466..987
DNA (522bp) protein (174aa)
Uncharacterized protein n=5 Tax=Propionibacterium RepID=M9VIX8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS37256.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1838.;"
L3_072_000G1_scaffold_704_3
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1021..2010
DNA (990bp) protein (330aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
Naphthoate synthase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D033_9ACTO
naphthoate synthase
L3_072_000G1_scaffold_704_4
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2050..3216
DNA (1167bp) protein (389aa)
O-succinylbenzoic acid--CoA ligase {ECO:0000313|EMBL:EGY77103.1}; EC=6.2.1.26 {ECO:0000313|EMBL:EGY77103.1};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
O-succinylbenzoic acid--CoA ligase n=2 Tax=Propionibacterium RepID=G4D034_9ACTO
2-succinylbenzoate--CoA ligase
L3_072_000G1_scaffold_704_5
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3277..4467
DNA (1191bp) protein (397aa)
Menaquinone-specific isochorismate synthase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WXA4_9ACTO
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:EPH01712.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
isochorismate synthetase, enterochelin biosynthesis
L3_072_000G1_scaffold_704_6
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4474..6024)
DNA (1551bp) protein (517aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Propionibacterium RepID=G4D036_9ACTO
2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit B
L3_072_000G1_scaffold_704_7
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6021..7031)
DNA (1011bp) protein (337aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050577};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
O-succinylbenzoic acid synthetase n=2 Tax=Propionibacterium RepID=G4D037_9ACTO
putative O-succinylbenzoic acid (OSB) synthetase
L3_072_000G1_scaffold_704_8
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7028..8863)
DNA (1836bp) protein (612aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Elongation factor 4 n=2 Tax=Propionibacterium RepID=G4D038_9ACTO
GTP-binding protein LepA
L3_072_000G1_scaffold_704_9
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9051..10964
DNA (1914bp) protein (638aa)
Amylosucrase {ECO:0000313|EMBL:EGY77108.1}; EC=2.4.1.4 {ECO:0000313|EMBL:EGY77108.1};; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
Amylosucrase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D039_9ACTO
alpha amylase
L3_072_000G1_scaffold_704_10
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11110..11376
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=8 Tax=Propionibacterium RepID=M9VBN4_9ACTO
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1852.;"
L3_072_000G1_scaffold_704_11
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11277..11510)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WV19_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01706.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
L3_072_000G1_scaffold_704_12
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11563..12528)
DNA (966bp) protein (322aa)
DNA polymerase III, delta subunit n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XZW3_9ACTO
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EPH01705.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
DNA polymerase III subunit delta
L3_072_000G1_scaffold_704_13
Propionibacterium sp. KPL2005, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12594..14342)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=2 Tax=Propionibacterium RepID=U7IRM8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS24081.1}; TaxID=1203633 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL2005.;"
type III restriction enzyme, res subunit
L3_072_000G1_scaffold_704_14
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14370..14459)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8K7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01703.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
L3_072_000G1_scaffold_704_15
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14456..16792)
DNA (2337bp) protein (779aa)
ComE operon protein 3 n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D043_9ACTO
ComE operon protein 3 {ECO:0000313|EMBL:EGY77112.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
putative ComE operon protein 3
L3_072_000G1_scaffold_704_16
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16779..17597)
DNA (819bp) protein (273aa)
ComE operon protein 1 n=2 Tax=Propionibacterium RepID=G4D044_9ACTO
Competence protein ComEA {ECO:0000313|EMBL:EPH01701.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ComE operon protein 1
L3_072_000G1_scaffold_704_17
Propionibacterium avidum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17786..20266)
DNA (2481bp) protein (827aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium avidum ATCC 25577.;"
leuS; leucyl-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D045_9ACTO
L3_072_000G1_scaffold_704_18
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20409..21236
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Propionibacterium RepID=S3WSJ1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01699.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
integral membrane protein
L3_072_000G1_scaffold_704_19
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21256..22260)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8K1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01698.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
L3_072_000G1_scaffold_704_20
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22400..22957
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WX93_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01697.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
glucoamylase S1/S2 precursor
L3_072_000G1_scaffold_704_21
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23067..24773)
DNA (1707bp) protein (569aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WV12_9ACTO
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:EPH01696.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
L3_072_000G1_scaffold_704_22
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24816..25784)
DNA (969bp) protein (323aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
L-lactate dehydrogenase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XZV6_9ACTO
L-lactate dehydrogenase
L3_072_000G1_scaffold_704_23
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25883..26530)
DNA (648bp) protein (216aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Thiamine-phosphate synthase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WSI6_9ACTO
thiamine-phosphate diphosphorylase
L3_072_000G1_scaffold_704_24
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26517..27326)
DNA (810bp) protein (270aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
Hydroxyethylthiazole kinase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8J6_9ACTO
hydroxyethylthiazole kinase
L3_072_000G1_scaffold_704_25
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27538..28905
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WX86_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01692.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
putative S12 family peptidase
L3_072_000G1_scaffold_704_26
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28910..30268)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WV08_9ACTO
transporter, major facilitator family protein
Uncharacterized protein {ECO:0000313|EMBL:EPH01691.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
L3_072_000G1_scaffold_704_27
unknown

Not on your lists

comp(31142..31462)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_072_000G1_scaffold_704_28
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32219..33625)
DNA (1407bp) protein (469aa)
Transcriptional regulator, GntR family n=2 Tax=Propionibacterium RepID=F5TSA7_9ACTO
GntR family transcriptional regulator
Putative GntR-family regulatory protein {ECO:0000313|EMBL:AAT82630.1}; TaxID=267747 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes (strain KPA171202 / DSM 16379).;"
L3_072_000G1_scaffold_704_29
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33716..34942
DNA (1227bp) protein (409aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RPL4_PROA4
ABC superfamily ATP binding cassette transporter permease
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:AFV88256.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
L3_072_000G1_scaffold_704_30
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34960..35790
DNA (831bp) protein (277aa)
Transcriptional regulator n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SG60_PROA4
Transcriptional regulator {ECO:0000313|EMBL:KFC15777.1}; TaxID=1271528 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes HL201PA1.;"
transcriptional regulator
Displaying 30 items

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