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L3_072_000G1_scaffold_725

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_725_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3..1499
DNA (1497bp) protein (499aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Superfamily II DNA and RNA helicase n=13 Tax=Lactobacillus rhamnosus RepID=B5QPP7_LACRH
deaD; ATP-dependent RNA helicase
L3_072_000G1_scaffold_725_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1668..2042
DNA (375bp) protein (125aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Holo-[acyl-carrier-protein] synthase n=13 Tax=Lactobacillus rhamnosus RepID=B5QPP6_LACRH
acpS; holo-[acyl-carrier-protein] synthase
L3_072_000G1_scaffold_725_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2029..3168
DNA (1140bp) protein (380aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Alanine racemase n=5 Tax=Lactobacillus rhamnosus RepID=C7TME6_LACRL
alr; alanine racemase
L3_072_000G1_scaffold_725_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3280..3528
DNA (249bp) protein (83aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=2 Tax=Lactobacillus rhamnosus RepID=C2JVC4_LACRH
hypothetical protein
Programmed cell death antitoxin YdcD {ECO:0000313|EMBL:EKS49803.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_725_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3482..3931
DNA (450bp) protein (150aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
mRNA interferase n=13 Tax=Lactobacillus RepID=B5QPP3_LACRH
mazF; transcriptional regulator PemK family
L3_072_000G1_scaffold_725_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4004..4300
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2GGU5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:KIC97128.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
hypothetical protein
L3_072_000G1_scaffold_725_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4445..4972
DNA (528bp) protein (176aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TME1_LACRL
ccl; membrane protein
Membrane protein {ECO:0000313|EMBL:AGP75217.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_725_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5268..9734
DNA (4467bp) protein (1489aa)
Glutamate synthase, large subunit n=5 Tax=Lactobacillus rhamnosus RepID=C7TME0_LACRL
gltB; glutamate synthase large subunit
Glutamate synthase (NADPH) large chain {ECO:0000313|EMBL:AGP75216.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_725_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9799..11235
DNA (1437bp) protein (479aa)
Glutamate synthase, small subunit n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7TMD9_LACRL
gltD; glutamate synthase subunit beta
Glutamate synthase {ECO:0000313|EMBL:KIC97131.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_725_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11315..12013)
DNA (699bp) protein (233aa)
ErfK/YbiS/YcfS/YnhG family protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TMD8_LACRL
L, D-transpeptidase catalytic domain protein
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:AGP75214.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_725_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12310..12975)
DNA (666bp) protein (222aa)
CBS domain containing protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QPN8_LACRH
dsg; CBS domain-containing protein
CBS domain protein {ECO:0000313|EMBL:EEN80986.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_725_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13144..13740)
DNA (597bp) protein (199aa)
NADPH-dependent FMN reductase family protein n=8 Tax=Lactobacillus rhamnosus RepID=G7UZ84_LACRH
NADPH-dependent FMN reductase family protein
Putative NADPH-quinone reductase (Modulator of drug activity B) {ECO:0000313|EMBL:AGP75212.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_725_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13804..15255)
DNA (1452bp) protein (484aa)
Phage-related protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TMD5_LACRL
yhgE/Pip N-terminal domain protein
Phage infection protein {ECO:0000313|EMBL:KIC97134.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_725_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15402..15938
DNA (537bp) protein (179aa)
Transcriptional regulator, PadR family n=7 Tax=Lactobacillus rhamnosus RepID=C7TMD4_LACRL
padR; transcriptional regulator PadR family
PadR family transcriptional regulator {ECO:0000313|EMBL:KIC97135.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_725_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16067..17359)
DNA (1293bp) protein (431aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JVD5_LACRH
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EEN80990.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_725_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17846..18826)
DNA (981bp) protein (327aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L-lactate dehydrogenase n=62 Tax=Lactobacillus RepID=LDH_LACCA
L-lactate dehydrogenase
L3_072_000G1_scaffold_725_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19287..19844
DNA (558bp) protein (186aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Peptidyl-tRNA hydrolase n=6 Tax=Lactobacillus rhamnosus RepID=C7T780_LACRG
pth; peptidyl-tRNA hydrolase
L3_072_000G1_scaffold_725_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19920..23447
DNA (3528bp) protein (1176aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Transcription-repair-coupling factor n=4 Tax=Lactobacillus rhamnosus RepID=C7TMD0_LACRL
mfd; transcription-repair coupling factor
L3_072_000G1_scaffold_725_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23525..25099
DNA (1575bp) protein (525aa)
Polysaccharide transport membrane protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TMC9_LACRL
polysaccharide biosynthesis family protein
Low temperature requirement B protein {ECO:0000313|EMBL:AGP75205.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_725_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25106..25369
DNA (264bp) protein (88aa)
Ribosome-associated heat shock protein n=13 Tax=Lactobacillus rhamnosus RepID=B5QPM9_LACRH
yabO; heat shock protein 15
S4-domain-containing heat shock protein {ECO:0000313|EMBL:EKS48906.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_725_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25462..25863
DNA (402bp) protein (134aa)
Septum formation initiator n=13 Tax=Lactobacillus rhamnosus RepID=B5QPM8_LACRH
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:EEN80996.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_725_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26147..26626
DNA (480bp) protein (160aa)
RNA binding S1 domain protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TMC6_LACRL
RNA binding protein, contains ribosomal protein S1 domain
S1 RNA binding domain protein {ECO:0000313|EMBL:EEN80998.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_725_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26747..28054
DNA (1308bp) protein (436aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
tRNA(Ile)-lysidine synthase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMC5_LACRL
tilS; tRNA(Ile)-lysidine synthetase
L3_072_000G1_scaffold_725_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28054..28599
DNA (546bp) protein (182aa)
Hypoxanthine phosphoribosyltransferase n=13 Tax=Lactobacillus rhamnosus RepID=C7T773_LACRG
hpt; hypoxanthine phosphoribosyltransferase
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KIC97145.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_725_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28661..30811
DNA (2151bp) protein (717aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=Lactobacillus rhamnosus RepID=C7TMC3_LACRL
ftsH; cell division protein FtsH
L3_072_000G1_scaffold_725_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31130..32014
DNA (885bp) protein (295aa)
33 kDa chaperonin n=4 Tax=Lactobacillus rhamnosus RepID=C7TMC1_LACRL
hslO; 33 kDa chaperonin
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_725_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32077..33078
DNA (1002bp) protein (334aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
tRNA-dihydrouridine synthase n=12 Tax=Lactobacillus rhamnosus RepID=B5QPM2_LACRH
dusB; tRNA-dihydrouridine synthase 1
L3_072_000G1_scaffold_725_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33226..34725
DNA (1500bp) protein (500aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Lysine--tRNA ligase n=2 Tax=Lactobacillus rhamnosus RepID=S5A686_LACRH
Lysyl-tRNA synthetase (class II)
Displaying 28 items

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