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L3_072_000G1_scaffold_726

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_726_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..255)
DNA (255bp) protein (85aa)
UPI0003D5BDC9 related cluster n=1 Tax=unknown RepID=UPI0003D5BDC9
Uncharacterized protein {ECO:0000313|EMBL:KGF11013.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_072_000G1_scaffold_726_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

433..1383
DNA (951bp) protein (317aa)
UPI0003D5BAA1 related cluster n=1 Tax=unknown RepID=UPI0003D5BAA1
YihY family protein {ECO:0000313|EMBL:ETI89007.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
putative ribonuclease
L3_072_000G1_scaffold_726_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1458..1964
DNA (507bp) protein (169aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5EA59 related cluster n=1 Tax=unknown RepID=UPI0003D5EA59
tRNA (cytidine/uridine-2'-O-)-methyltransferase HMPREF0889_0049
L3_072_000G1_scaffold_726_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1951..2322
DNA (372bp) protein (124aa)
UPI0003D5B7F0 related cluster n=1 Tax=unknown RepID=UPI0003D5B7F0
Uncharacterized protein {ECO:0000313|EMBL:ETI89005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_072_000G1_scaffold_726_5
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2319..3263
DNA (945bp) protein (315aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQ65_SELRL
L3_072_000G1_scaffold_726_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3253..4584
DNA (1332bp) protein (444aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|SAAS:SAAS00020486}; EC=2.7.7.56 {ECO:0000256|SAAS:SAAS00104188};; EC=3.6.1.19 {ECO:0000256|SAAS:SAAS00020468};; Ribonuclease PH {ECO:0000256|SAAS:SAAS00104182}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
rph; ribonuclease PH (EC:2.7.7.56)
UPI0003D605B9 related cluster n=1 Tax=unknown RepID=UPI0003D605B9
L3_072_000G1_scaffold_726_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4678..5391
DNA (714bp) protein (238aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D65522 related cluster n=1 Tax=unknown RepID=UPI0003D65522
S-adenosylmethionine decarboxylase proenzyme
L3_072_000G1_scaffold_726_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5409..6605
DNA (1197bp) protein (399aa)
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (EC:1.1.1.40)
UPI0003D60A4A related cluster n=1 Tax=unknown RepID=UPI0003D60A4A
Malate dehydrogenase {ECO:0000313|EMBL:KGF11018.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_072_000G1_scaffold_726_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7236..7718
DNA (483bp) protein (161aa)
UPI0003D61DFC related cluster n=1 Tax=unknown RepID=UPI0003D61DFC
Uncharacterized protein {ECO:0000313|EMBL:KGF11019.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_072_000G1_scaffold_726_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7847..7996
DNA (150bp) protein (50aa)
Uncharacterized protein n=15 Tax=Veillonella RepID=D1BLR5_VEIPT
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:ETI86785.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_072_000G1_scaffold_726_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8051..9466
DNA (1416bp) protein (472aa)
UPI0003D62443 related cluster n=1 Tax=unknown RepID=UPI0003D62443
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:ETI86784.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
radical SAM domain protein
L3_072_000G1_scaffold_726_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9530..9982
DNA (453bp) protein (151aa)
UPI0003D68A33 related cluster n=1 Tax=unknown RepID=UPI0003D68A33
Uncharacterized protein {ECO:0000313|EMBL:ETI86783.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_072_000G1_scaffold_726_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10083..11567
DNA (1485bp) protein (495aa)
UPI0003D671A4 related cluster n=1 Tax=unknown RepID=UPI0003D671A4
Uncharacterized protein {ECO:0000313|EMBL:ETI86782.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_072_000G1_scaffold_726_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11576..13030
DNA (1455bp) protein (485aa)
UPI0003D5A911 related cluster n=1 Tax=unknown RepID=UPI0003D5A911
Uncharacterized protein {ECO:0000313|EMBL:KGF11021.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_726_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13030..13563
DNA (534bp) protein (178aa)
UPI0003D6227F related cluster n=1 Tax=unknown RepID=UPI0003D6227F
Uncharacterized protein {ECO:0000313|EMBL:KGF11022.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_072_000G1_scaffold_726_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13560..14786
DNA (1227bp) protein (409aa)
UPI0003D66D74 related cluster n=1 Tax=unknown RepID=UPI0003D66D74
ABC transporter {ECO:0000313|EMBL:ETI86779.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
type II and III secretion system protein
L3_072_000G1_scaffold_726_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14815..16656
DNA (1842bp) protein (614aa)
UPI0003D66D74 related cluster n=1 Tax=unknown RepID=UPI0003D66D74
ABC transporter {ECO:0000313|EMBL:KGF11023.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
ABC transporter
L3_072_000G1_scaffold_726_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17308..18645
DNA (1338bp) protein (446aa)
UPI0003D5BB8C related cluster n=1 Tax=unknown RepID=UPI0003D5BB8C
Uncharacterized protein {ECO:0000313|EMBL:ETI87217.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
4-aminobutyrate aminotransferase
L3_072_000G1_scaffold_726_19
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18657..19757
DNA (1101bp) protein (367aa)
UPI0003D6531E related cluster n=1 Tax=unknown RepID=UPI0003D6531E
Membrane protein {ECO:0000313|EMBL:KGF07545.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_726_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19825..20868)
DNA (1044bp) protein (348aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D62522 related cluster n=1 Tax=unknown RepID=UPI0003D62522
biotin synthase
L3_072_000G1_scaffold_726_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21026..22402
DNA (1377bp) protein (459aa)
UPI0003D62514 related cluster n=1 Tax=unknown RepID=UPI0003D62514
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ETI87214.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
transcriptional regulator
L3_072_000G1_scaffold_726_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22404..23684
DNA (1281bp) protein (427aa)
UPI0003D64788 related cluster n=1 Tax=unknown RepID=UPI0003D64788
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:ETI87213.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Ser/Thr phosphatase family protein
L3_072_000G1_scaffold_726_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23671..26652
DNA (2982bp) protein (994aa)
UPI0003D65E4C related cluster n=1 Tax=unknown RepID=UPI0003D65E4C
Uncharacterized protein {ECO:0000313|EMBL:KGF07542.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_726_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26731..27510)
DNA (780bp) protein (260aa)
UPI0003D5DB81 related cluster n=1 Tax=unknown RepID=UPI0003D5DB81
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ETI86577.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
transglycosylase
L3_072_000G1_scaffold_726_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27656..28894
DNA (1239bp) protein (413aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5EFDA related cluster n=1 Tax=unknown RepID=UPI0003D5EFDA
argininosuccinate synthase
L3_072_000G1_scaffold_726_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28891..30315
DNA (1425bp) protein (475aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Argininosuccinate lyase (EC:4.3.2.1)
UPI0003D5DB8B related cluster n=1 Tax=unknown RepID=UPI0003D5DB8B
L3_072_000G1_scaffold_726_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30347..30922)
DNA (576bp) protein (192aa)
UPI0003D5CD59 related cluster n=1 Tax=unknown RepID=UPI0003D5CD59
Uncharacterized protein {ECO:0000313|EMBL:ETI86628.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_726_28
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31093..32034
DNA (942bp) protein (314aa)
UPI0003D5BC09 related cluster n=1 Tax=unknown RepID=UPI0003D5BC09
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KGF07538.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
putative UDP-glucose 4-epimerase
L3_072_000G1_scaffold_726_29
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32058..32639)
DNA (582bp) protein (194aa)
UPI0003D59EC9 related cluster n=1 Tax=unknown RepID=UPI0003D59EC9
Uncharacterized protein {ECO:0000313|EMBL:KGF07537.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_072_000G1_scaffold_726_30
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32870..34819)
DNA (1950bp) protein (650aa)
UPI0003D5FEA3 related cluster n=1 Tax=unknown RepID=UPI0003D5FEA3
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGF07536.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
TRAP transporter, 4TM/12TM fusion protein
Displaying items 1-30 of 31 in total

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