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L3_072_000G1_scaffold_731

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_731_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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184..2262
DNA (2079bp) protein (693aa)
UPI0003D5955C related cluster n=1 Tax=unknown RepID=UPI0003D5955C
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UvrABC system protein B
L3_072_000G1_scaffold_731_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2276..5137
DNA (2862bp) protein (954aa)
UPI0003D658B0 related cluster n=1 Tax=unknown RepID=UPI0003D658B0
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
excinuclease ABC subunit A
L3_072_000G1_scaffold_731_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5121..6983
DNA (1863bp) protein (621aa)
UPI0003D65C65 related cluster n=1 Tax=unknown RepID=UPI0003D65C65
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
excinuclease ABC subunit C
L3_072_000G1_scaffold_731_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7361..8263
DNA (903bp) protein (301aa)
UPI0003D659F2 related cluster n=1 Tax=unknown RepID=UPI0003D659F2
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:ETI89430.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_072_000G1_scaffold_731_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8294..9157
DNA (864bp) protein (288aa)
UPI0003D62BF8 related cluster n=1 Tax=unknown RepID=UPI0003D62BF8
Phosphate ABC transporter permease {ECO:0000313|EMBL:KGF12334.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
pstC; phosphate ABC transporter permease PstC
L3_072_000G1_scaffold_731_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9154..9990
DNA (837bp) protein (279aa)
UPI0003D6229D related cluster n=1 Tax=unknown RepID=UPI0003D6229D
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:ETI89428.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_072_000G1_scaffold_731_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9992..10747
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
pstB; ABC transporter ATPase (EC:3.6.3.27)
UPI0003D641C6 related cluster n=1 Tax=unknown RepID=UPI0003D641C6
L3_072_000G1_scaffold_731_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10791..11432
DNA (642bp) protein (214aa)
UPI0003D5CBF3 related cluster n=1 Tax=unknown RepID=UPI0003D5CBF3
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
phosphate uptake regulator
L3_072_000G1_scaffold_731_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11439..12122
DNA (684bp) protein (228aa)
UPI0003D5E5FD related cluster n=1 Tax=unknown RepID=UPI0003D5E5FD
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGF12330.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
two component transcriptional regulator, winged helix family
L3_072_000G1_scaffold_731_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12119..13903
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5C562 related cluster n=1 Tax=unknown RepID=UPI0003D5C562
histidine kinase
L3_072_000G1_scaffold_731_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14059..15309
DNA (1251bp) protein (417aa)
UPI0003D62FA7 related cluster n=1 Tax=unknown RepID=UPI0003D62FA7
Aminotransferase {ECO:0000313|EMBL:KGF12328.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
aminotransferase class I and II
L3_072_000G1_scaffold_731_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15431..16279
DNA (849bp) protein (283aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5C2F7 related cluster n=1 Tax=unknown RepID=UPI0003D5C2F7
UDP-3-0-acyl N-acetylglucosamine deacetylase
L3_072_000G1_scaffold_731_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16276..16734
DNA (459bp) protein (153aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D65817 related cluster n=1 Tax=unknown RepID=UPI0003D65817
3-hydroxyacyl-ACP dehydratase
L3_072_000G1_scaffold_731_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16905..17717
DNA (813bp) protein (271aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D689C6 related cluster n=1 Tax=unknown RepID=UPI0003D689C6
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
L3_072_000G1_scaffold_731_15
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18166..18381
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P3I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04256.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
L3_072_000G1_scaffold_731_16
unknown

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18945..19130
DNA (186bp) protein (62aa)

This feature has no annotations

L3_072_000G1_scaffold_731_17
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19344..20168
DNA (825bp) protein (275aa)
UPI0003D5F513 related cluster n=1 Tax=unknown RepID=UPI0003D5F513
Uncharacterized protein {ECO:0000313|EMBL:KGF12319.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_731_18
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20165..21304
DNA (1140bp) protein (380aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5AE0B related cluster n=1 Tax=unknown RepID=UPI0003D5AE0B
lipid-A-disaccharide synthase
L3_072_000G1_scaffold_731_19
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21297..23027
DNA (1731bp) protein (577aa)
UPI0003D62EED related cluster n=1 Tax=unknown RepID=UPI0003D62EED
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF12317.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
lipid A export permease/ATP-binding protein MsbA
L3_072_000G1_scaffold_731_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23029..24360
DNA (1332bp) protein (444aa)
UPI0003D61AC0 related cluster n=1 Tax=unknown RepID=UPI0003D61AC0
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:ETI85009.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
3-deoxy-D-manno-octulosonic-acid transferase
L3_072_000G1_scaffold_731_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24344..25462
DNA (1119bp) protein (373aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D66883 related cluster n=1 Tax=unknown RepID=UPI0003D66883
tetraacyldisaccharide 4'-kinase
L3_072_000G1_scaffold_731_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25444..26211
DNA (768bp) protein (256aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D6461E related cluster n=1 Tax=unknown RepID=UPI0003D6461E
3-deoxy-manno-octulosonate cytidylyltransferase
L3_072_000G1_scaffold_731_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26189..27016
DNA (828bp) protein (276aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D6369C related cluster n=1 Tax=unknown RepID=UPI0003D6369C
2-dehydro-3-deoxyphosphooctonate aldolase
L3_072_000G1_scaffold_731_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27013..27984
DNA (972bp) protein (324aa)
UPI0003D61308 related cluster n=1 Tax=unknown RepID=UPI0003D61308
Uncharacterized protein {ECO:0000313|EMBL:ETI85005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
arabinose 5-phosphate isomerase
L3_072_000G1_scaffold_731_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27984..28517
DNA (534bp) protein (178aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
UPI0003D5B542 related cluster n=1 Tax=unknown RepID=UPI0003D5B542
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:ETI85004.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_072_000G1_scaffold_731_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28531..29451
DNA (921bp) protein (307aa)
UPI0003D623A1 related cluster n=1 Tax=unknown RepID=UPI0003D623A1
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase family protein {ECO:0000313|EMBL:ETI85003.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
lipid A biosynthesis acyltransferase
L3_072_000G1_scaffold_731_27
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29448..29993
DNA (546bp) protein (182aa)
UPI0003D69382 related cluster n=1 Tax=unknown RepID=UPI0003D69382
Uncharacterized protein {ECO:0000313|EMBL:KGF12312.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_072_000G1_scaffold_731_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30011..30697
DNA (687bp) protein (229aa)
UPI0003D60D0A related cluster n=1 Tax=unknown RepID=UPI0003D60D0A
OstA-like protein {ECO:0000313|EMBL:ETI85001.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
OstA family protein
L3_072_000G1_scaffold_731_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30699..31424
DNA (726bp) protein (242aa)
UPI0003D5E7C2 related cluster n=1 Tax=unknown RepID=UPI0003D5E7C2
ABC transporter {ECO:0000313|EMBL:ETI85000.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC transporter
L3_072_000G1_scaffold_731_30
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31476..32564
DNA (1089bp) protein (363aa)
UPI0003D69717 related cluster n=1 Tax=unknown RepID=UPI0003D69717
Permease {ECO:0000313|EMBL:KGF12309.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Predicted permeases
Displaying items 1-30 of 33 in total

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