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L3_072_000G1_scaffold_763

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_763_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1614)
DNA (1614bp) protein (538aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Probable phosphoketolase n=7 Tax=Bifidobacterium bifidum RepID=E3EQW1_BIFBS
xylulose-5-phosphate/Fructose-6-phosphate phosphoketolase
L3_072_000G1_scaffold_763_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2143..3705
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
GMP synthase [glutamine-hydrolyzing] n=4 Tax=Bifidobacterium bifidum RepID=E3EQW0_BIFBS
guaA; GMP synthase
L3_072_000G1_scaffold_763_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4246..4878)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V968_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53001.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_763_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5037..5252
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V965_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50158.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_000G1_scaffold_763_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5222..5440)
DNA (219bp) protein (73aa)
Phage transcriptional regulator n=3 Tax=Bifidobacterium bifidum RepID=I3WHJ1_BIFBI
alpA; phage transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ADO52999.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_763_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6052..6693
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WHJ0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52998.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_763_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7501..8172)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WHI7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52996.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_763_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8737..10218
DNA (1482bp) protein (494aa)
ATP-dependent Zn protease n=2 Tax=Bifidobacterium RepID=E4P179_BIFBP
ATP-dependent Zn protease
ATP-dependent Zn protease {ECO:0000313|EMBL:CDB22271.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_072_000G1_scaffold_763_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10215..12029
DNA (1815bp) protein (605aa)
Phosphate acetyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQV2_BIFBS
Phosphate acetyltransferase {ECO:0000313|EMBL:ADO52994.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
pta; phosphate acetyltransferase
L3_072_000G1_scaffold_763_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12311..13540
DNA (1230bp) protein (410aa)
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Acetate kinase n=6 Tax=Bifidobacterium RepID=I3WHI4_BIFBI
L3_072_000G1_scaffold_763_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13654..15165)
DNA (1512bp) protein (504aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
aroA; 3-phosphoshikimate 1-carboxyvinyl transferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEM7_BIFBI
L3_072_000G1_scaffold_763_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15206..15823
DNA (618bp) protein (206aa)
Peptidase E {ECO:0000313|EMBL:KFI42827.1}; EC=3.4.13.21 {ECO:0000313|EMBL:KFI42827.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Peptidase E n=5 Tax=Bifidobacterium RepID=E3EQU9_BIFBS
putative peptidase
L3_072_000G1_scaffold_763_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16301..17113
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V955_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42826.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_000G1_scaffold_763_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17270..17962
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V953_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50145.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_072_000G1_scaffold_763_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18057..18605)
DNA (549bp) protein (183aa)
Intracellular protease, PfpI family n=2 Tax=Bifidobacterium bifidum RepID=E4V952_BIFBI
Intracellular protease, PfpI family {ECO:0000313|EMBL:ERI82482.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97967.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
ThiJ/PfpI domain-containing protein
L3_072_000G1_scaffold_763_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18731..19591)
DNA (861bp) protein (287aa)
aldo/keto reductase family (EC:1.1.1.64)
Organophosphate reductase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V951_BIFBI
Organophosphate reductase {ECO:0000313|EMBL:EFR50143.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_072_000G1_scaffold_763_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19757..20158
DNA (402bp) protein (134aa)
Putative HTH-type transcriptional regulator AdhR n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BWA2_BIFBI
Putative HTH-type transcriptional regulator AdhR {ECO:0000313|EMBL:KFI42822.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Predicted transcriptional regulators
L3_072_000G1_scaffold_763_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20272..20709
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=2 Tax=Bifidobacterium bifidum RepID=E4V949_BIFBI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KFI42821.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
putative transcription regulator
L3_072_000G1_scaffold_763_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20826..21041
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DRW2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42820.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter
L3_072_000G1_scaffold_763_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21269..21508
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2DLR5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82487.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
acetyltransferase, GNAT family
L3_072_000G1_scaffold_763_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21557..21835
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V947_BIFBI
Acetyltransferase {ECO:0000313|EMBL:KFI42818.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_072_000G1_scaffold_763_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22145..22312)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V946_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82490.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_072_000G1_scaffold_763_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23107..24324
DNA (1218bp) protein (406aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P173_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51406.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_072_000G1_scaffold_763_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24400..26571)
DNA (2172bp) protein (724aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
glgX; glycogen operon protein GlgX (EC:3.2.1.68)
Glycogen operon protein glgX n=4 Tax=Bifidobacterium RepID=E3EQU6_BIFBS
L3_072_000G1_scaffold_763_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26604..27335)
DNA (732bp) protein (244aa)
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P171_BIFBP
Phosphohydrolase {ECO:0000313|EMBL:EKF15739.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_000G1_scaffold_763_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27389..28306)
DNA (918bp) protein (306aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MUP3_BIFBI
hypothetical protein
L3_072_000G1_scaffold_763_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28363..31194)
DNA (2832bp) protein (944aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EFR50133.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFR50133.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
polA; DNA polymerase I (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V941_BIFBI
L3_072_000G1_scaffold_763_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31191..31967)
DNA (777bp) protein (259aa)
Transcriptional regulator n=8 Tax=Bifidobacterium RepID=E3EQU2_BIFBS
amiR; putative two-component system responseregulator
Transcriptional regulator {ECO:0000313|EMBL:ADO52984.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_072_000G1_scaffold_763_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32375..32974
DNA (600bp) protein (200aa)
aspA; ADP-ribose pyrophosphatase (EC:3.6.1.13)
AspA ADP-ribose pyrophosphatase n=5 Tax=Bifidobacterium RepID=E4P167_BIFBP
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EKF16358.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_072_000G1_scaffold_763_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33183..34046)
DNA (864bp) protein (288aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Pyruvate kinase n=7 Tax=Bifidobacterium RepID=E3EQU0_BIFBS
pyk; Pyruvate kinase
Displaying items 1-30 of 35 in total

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