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L3_072_000G1_scaffold_2612

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_2612_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..721)
DNA (720bp) protein (240aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNK6_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EKY29568.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
oxidoreductase domain-containing protein
L3_072_000G1_scaffold_2612_2
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(891..2000)
DNA (1110bp) protein (370aa)
ABC-type transport system, sugar-familyATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=1 Tax=Clostridium difficile CD22 RepID=T2VCQ5_CLODI
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ50751.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_072_000G1_scaffold_2612_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2222..3103)
DNA (882bp) protein (294aa)
AP endonuclease family 2 n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5V4_9CLOT
AP endonuclease family 2 {ECO:0000313|EMBL:CDD38939.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Sugar phosphate isomerases/epimerases
L3_072_000G1_scaffold_2612_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3100..4023)
DNA (924bp) protein (308aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.-.-)
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:CBK75961.1}; EC=3.2.-.- {ECO:0000313|EMBL:CBK75961.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DE37_CLOSC
L3_072_000G1_scaffold_2612_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4016..5368)
DNA (1353bp) protein (451aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DE36_CLOSC
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBK75960.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_072_000G1_scaffold_2612_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5401..6225)
DNA (825bp) protein (275aa)
ABC-type sugar transport system, permease component n=2 Tax=Clostridiales RepID=D4MPA9_9FIRM
ABC-type sugar transport system, permease component
ABC transporter, permease protein {ECO:0000313|EMBL:EFE12754.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_072_000G1_scaffold_2612_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6225..7115)
DNA (891bp) protein (297aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5ML39_9CLOT
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KEZ90648.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L3_072_000G1_scaffold_2612_8
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7117..7914)
DNA (798bp) protein (266aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MPB0_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL35596.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_072_000G1_scaffold_2612_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7919..8659)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Enterococcus avium ATCC 14025 RepID=S0L2C5_ENTAV
Uncharacterized protein {ECO:0000313|EMBL:KEZ90283.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
GntR family transcriptional regulator
L3_072_000G1_scaffold_2612_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9106..9702)
DNA (597bp) protein (199aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lepB-1; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H280_9CLOT
L3_072_000G1_scaffold_2612_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9806..9970)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97315.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_2612_12
unknown

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comp(9973..10146)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_072_000G1_scaffold_2612_13
unknown

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comp(10150..10605)
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying 13 items

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