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L3_072_000G1_scaffold_2044

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_2044_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..117)
DNA (117bp) protein (39aa)
Putative ABC transporter n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W307_9ACTO
Antibiotic ABC transporter permease {ECO:0000313|EMBL:KGF05045.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
L3_072_000G1_scaffold_2044_2
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(114..893)
DNA (780bp) protein (260aa)
UPI0003D605AE related cluster n=1 Tax=unknown RepID=UPI0003D605AE
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETJ05347.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
ABC transporter family protein
L3_072_000G1_scaffold_2044_3
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(946..1545)
DNA (600bp) protein (200aa)
UPI0003D5AC25 related cluster n=1 Tax=unknown RepID=UPI0003D5AC25
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETJ05346.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
transcriptional regulator
L3_072_000G1_scaffold_2044_4
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1683..2483)
DNA (801bp) protein (267aa)
UPI0003D68386 related cluster n=1 Tax=unknown RepID=UPI0003D68386
Alcohol dehydrogenase zinc-binding protein {ECO:0000313|EMBL:ETJ05345.1}; Flags: Fragment;; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
alcohol dehydrogenase, zinc-binding protein
L3_072_000G1_scaffold_2044_5
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3179..3418)
DNA (240bp) protein (80aa)
UPI0003D6284A related cluster n=1 Tax=unknown RepID=UPI0003D6284A
Plasmid stability protein StbC {ECO:0000313|EMBL:ETJ07434.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
arc-like DNA binding domain protein
L3_072_000G1_scaffold_2044_6
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3510..3728)
DNA (219bp) protein (73aa)
MgsA AAA+ ATPase, C-terminal domain protein n=1 Tax=Actinomyces massiliensis F0489 RepID=J1HN64_9ACTO
MgsA AAA+ ATPase, C-terminal domain protein {ECO:0000313|EMBL:EJF47038.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
recombination protein RarA
L3_072_000G1_scaffold_2044_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3837..4592)
DNA (756bp) protein (252aa)
UPI0003D5A292 related cluster n=1 Tax=unknown RepID=UPI0003D5A292
Crossover junction endodeoxyribonuclease ATPase {ECO:0000313|EMBL:ETJ01232.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
recombination protein RarA
L3_072_000G1_scaffold_2044_8
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4816..5769
DNA (954bp) protein (318aa)
UPI0003D62B63 related cluster n=2 Tax=unknown RepID=UPI0003D62B63
Abortive infection bacteriophage resistance protein {ECO:0000313|EMBL:ETJ01231.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L3_072_000G1_scaffold_2044_9
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5968..6171
DNA (204bp) protein (68aa)
UPI0003D5D723 related cluster n=1 Tax=unknown RepID=UPI0003D5D723
Phage protein {ECO:0000313|EMBL:ETJ01230.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
phage protein
L3_072_000G1_scaffold_2044_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6236..9292)
DNA (3057bp) protein (1019aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
UPI0003D68F00 related cluster n=1 Tax=unknown RepID=UPI0003D68F00
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ETJ07339.1}; Flags: Fragment;; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
L3_072_000G1_scaffold_2044_11
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9347..10300)
DNA (954bp) protein (318aa)
UPI0003D5956B related cluster n=1 Tax=unknown RepID=UPI0003D5956B
Methionine sulfoxide reductase A {ECO:0000313|EMBL:ETJ01367.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L3_072_000G1_scaffold_2044_12
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10303..11460)
DNA (1158bp) protein (386aa)
UPI0003D59A7B related cluster n=1 Tax=unknown RepID=UPI0003D59A7B
Type I Restriction endonuclease S subunit {ECO:0000313|EMBL:ETJ01366.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
type I restriction-modification system specificity determinant
L3_072_000G1_scaffold_2044_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11457..13016)
DNA (1560bp) protein (520aa)
UPI0003D5E4B7 related cluster n=1 Tax=unknown RepID=UPI0003D5E4B7
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:ETJ01365.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
type I restriction-modification system, M subunit
L3_072_000G1_scaffold_2044_14
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13142..13561)
DNA (420bp) protein (140aa)
UPI0003D641D8 related cluster n=1 Tax=unknown RepID=UPI0003D641D8
Uncharacterized protein {ECO:0000313|EMBL:ETJ01364.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L3_072_000G1_scaffold_2044_15
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13692..13814)
DNA (123bp) protein (41aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
UPI0003D64311 related cluster n=1 Tax=unknown RepID=UPI0003D64311
hypothetical protein
Displaying 15 items

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