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L3_072_000G1_scaffold_2475

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_2475_1
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..229)
DNA (228bp) protein (76aa)
signal peptide protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003070198
Signal peptide protein {ECO:0000313|EMBL:KGF33407.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
FHA domain protein
L3_072_000G1_scaffold_2475_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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356..973
DNA (618bp) protein (206aa)
Regulatory protein RecX n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF9_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_000G1_scaffold_2475_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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966..1262
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E5768B
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EFR33121.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative endonuclease containing a URI domain
L3_072_000G1_scaffold_2475_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1300..3132)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031DDB2B
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33116.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_000G1_scaffold_2475_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3141..4085)
DNA (945bp) protein (315aa)
single-stranded DNA endonuclease n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F24B56
NurA domain protein {ECO:0000313|EMBL:EFR33087.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
NurA domain protein
L3_072_000G1_scaffold_2475_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4079..4876)
DNA (798bp) protein (266aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rsmI; Ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
methyltransferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FAB110
L3_072_000G1_scaffold_2475_7
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4840..5562)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003065556
Methyltransferase domain protein {ECO:0000313|EMBL:EFA89340.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
putative SAM-dependent methyltransferase
L3_072_000G1_scaffold_2475_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5553..6734)
DNA (1182bp) protein (394aa)
capsule synthesis protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F2D7A3
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EFR33113.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CapA domain protein
L3_072_000G1_scaffold_2475_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6722..7315)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D82110
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33090.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DNA integration/recombination/invertion protein
L3_072_000G1_scaffold_2475_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7382..8140)
DNA (759bp) protein (253aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
lgt; Prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
prolipoprotein diacylglyceryl transferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DE8B8B
L3_072_000G1_scaffold_2475_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8131..8796)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
deoC; Deoxyribose-phosphate aldolase (EC:4.1.2.4)
deoxyribose-phosphate aldolase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FE036F
L3_072_000G1_scaffold_2475_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8796..9521)
DNA (726bp) protein (242aa)
transcriptional regulator n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D9C2FD
Probable transcriptional regulatory protein HMPREF9286_0999 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative transcriptional regulatory protein Clos_1778
L3_072_000G1_scaffold_2475_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9630..10940)
DNA (1311bp) protein (437aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYE7_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFR33081.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
histidine kinase
L3_072_000G1_scaffold_2475_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10934..11419)
DNA (486bp) protein (162aa)
regulator n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D9622C
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:EFR33051.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
two-component response regulator
Displaying 14 items

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