ggKbase home page

L3_072_000G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 53 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_397_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..765)
DNA (765bp) protein (255aa)
Replicative DNA helicase {ECO:0000313|EMBL:EFR33756.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR33756.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
dnaC; Replicative DNA helicase (EC:3.6.4.12)
DNA helicase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000360F4E2
L3_072_000G1_scaffold_397_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(744..1220)
DNA (477bp) protein (159aa)
50S ribosomal protein L9 n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E06B6C
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rplI; 50S ribosomal protein L9
L3_072_000G1_scaffold_397_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1222..3219)
DNA (1998bp) protein (666aa)
phosphoesterase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D37A60
DHHA1 domain protein {ECO:0000313|EMBL:EFR33615.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DHH subfamily 1 protein
L3_072_000G1_scaffold_397_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3231..4148)
DNA (918bp) protein (306aa)
membrane protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F88D4F
Putative membrane protein {ECO:0000313|EMBL:EFR33632.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_000G1_scaffold_397_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4274..5116)
DNA (843bp) protein (281aa)
6-phosphogluconate dehydratase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E21EF0
EDD domain protein, DegV family {ECO:0000313|EMBL:EFR33666.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
degV family protein
L3_072_000G1_scaffold_397_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5814..6053
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWN2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33766.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_000G1_scaffold_397_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6133..7710)
DNA (1578bp) protein (526aa)
aminobenzoyl-glutamate transporter n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031A9AF0
AbgT transporter family {ECO:0000313|EMBL:EFR33661.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
efflux pump component mtrF
L3_072_000G1_scaffold_397_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7978..8646
DNA (669bp) protein (223aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EFR33722.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFR33722.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
serine dehydratase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003148CF5
L-serine dehydratase, iron-sulfur-dependent subunit beta
L3_072_000G1_scaffold_397_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8647..9528
DNA (882bp) protein (294aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EFR33664.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFR33664.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
sdhA; L-serine dehydratase, alpha chain (EC:4.3.1.17)
serine dehydratase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D5C71A
L3_072_000G1_scaffold_397_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9530..10771
DNA (1242bp) protein (414aa)
sodium:dicarboxylate symporter n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030DA007
Serine/threonine transporter family protein {ECO:0000313|EMBL:EFR33767.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
dctP; TRAP tripartite ATP-independent transporter, binding protein
L3_072_000G1_scaffold_397_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10900..11634
DNA (735bp) protein (245aa)
fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E0029F
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFR33594.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L3_072_000G1_scaffold_397_12
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11659..12777
DNA (1119bp) protein (373aa)
putative lipid kinase SP_1045 (EC:2.7.1.-)
Putative lipid kinase SP_1045 {ECO:0000313|EMBL:CDZ75400.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDZ75400.1};; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D8612F
L3_072_000G1_scaffold_397_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13467..14444
DNA (978bp) protein (326aa)
amidinotransferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031A9B26
Amidinotransferase {ECO:0000313|EMBL:EFR33723.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
amidinotransferase
L3_072_000G1_scaffold_397_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14577..15317
DNA (741bp) protein (247aa)
Sortase, SrtB family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWM2_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:EFR33622.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
sortase
L3_072_000G1_scaffold_397_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15394..16038
DNA (645bp) protein (215aa)
REX family transcriptional regulator n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D94946
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
redox-sensing transcriptional repressor Rex
L3_072_000G1_scaffold_397_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16066..16941
DNA (876bp) protein (292aa)
8-oxoguanine DNA-glycosylase (Ogg) {ECO:0000313|EMBL:EFR33702.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFR33702.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
8-oxoguanine DNA glycosylase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002EBC954
8-oxoguanine DNA glycosylase
L3_072_000G1_scaffold_397_17
Anaerococcus lactolyticus, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17047..17433
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BEX1_9FIRM
Membrane protein {ECO:0000313|EMBL:KGF04538.1}; TaxID=1284686 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus lactolyticus S7-1-13.;"
hypothetical protein
L3_072_000G1_scaffold_397_18
unknown

Not on your lists

comp(17430..17531)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_072_000G1_scaffold_397_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17730..18884)
DNA (1155bp) protein (385aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFR33739.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFR33739.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
aminotransferase (EC:2.6.1.-)
aspartate aminotransferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FBB81A
L3_072_000G1_scaffold_397_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19036..20283
DNA (1248bp) protein (416aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000317FE8B
L3_072_000G1_scaffold_397_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20305..21834
DNA (1530bp) protein (510aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWL6_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFR33738.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
extracellular solute-binding protein
L3_072_000G1_scaffold_397_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21902..22831
DNA (930bp) protein (310aa)
Dipeptide ABC transporter, permease protein DppB n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWL5_9FIRM
Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EFR33621.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
binding-protein-dependent transport system inner membrane protein
L3_072_000G1_scaffold_397_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22839..23681
DNA (843bp) protein (281aa)
diguanylate cyclase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DC0E73
Oligopeptide ABC transporter, permease protein AppC {ECO:0000313|EMBL:EFR33690.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
binding-protein-dependent transport systems inner membrane component
L3_072_000G1_scaffold_397_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23683..24642
DNA (960bp) protein (320aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D51817
Oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:EFR33592.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ABC-type transport system, ATP-binding protein;putative oligopeptide transport system
L3_072_000G1_scaffold_397_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24644..25444
DNA (801bp) protein (267aa)
peptide ABC transporter ATPase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030EF17A
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:EFR33764.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
oppF; oligopeptide transport system, ATP-binding protein OppF
L3_072_000G1_scaffold_397_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25527..26210
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000319CC8E
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33649.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_072_000G1_scaffold_397_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26203..27051
DNA (849bp) protein (283aa)
molecular chaperone DnaJ n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D6ECEC
DnaJ domain protein {ECO:0000313|EMBL:EFR33741.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative DnaJ domain protein
L3_072_000G1_scaffold_397_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27162..27932)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003020DD9
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33707.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L3_072_000G1_scaffold_397_29
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27925..28497)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DCDB76
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_072_000G1_scaffold_397_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28595..30160)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028878C3
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR33694.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
Displaying items 1-30 of 53 in total

View Taxonomy