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L3_072_000G1_scaffold_1137

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_1137_1
Pantoea sp. aB, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(332..1183)
DNA (852bp) protein (284aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=517433 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. aB.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Pantoea sp. aB RepID=E0M3W1_9ENTR
L3_072_000G1_scaffold_1137_2
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1128..3005)
DNA (1878bp) protein (626aa)
Vitamin B12 transporter BtuB n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VTC1_ENTAG
Vitamin B12 transporter BtuB {ECO:0000256|HAMAP-Rule:MF_01531}; Cobalamin receptor {ECO:0000256|HAMAP-Rule:MF_01531}; Outer membrane cobalamin translocator {ECO:0000256|HAMAP-Rule:MF_01531}; Flags: Precursor;; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
btuB; outer membrane cobalamin receptor protein
L3_072_000G1_scaffold_1137_3
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3368..4480
DNA (1113bp) protein (371aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
tRNA/tmRNA (uracil-C(5))-methyltransferase n=4 Tax=Pantoea ananas RepID=D4GDW0_PANAM
trmA; tRNA (uracil-5-)-methyltransferase TrmA
L3_072_000G1_scaffold_1137_4
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4567..4923)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DIS9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKD30655.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yijD; hypothetical protein
L3_072_000G1_scaffold_1137_5
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4941..5585)
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=3 Tax=Pantoea RepID=E0M3W5_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KGT91295.1}; TaxID=69218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus.;"
L3_072_000G1_scaffold_1137_6
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5777..7177
DNA (1401bp) protein (467aa)
Soluble pyridine nucleotide transhydrogenase {ECO:0000256|HAMAP-Rule:MF_00247}; Short=STH {ECO:0000256|HAMAP-Rule:MF_00247};; EC=1.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00247};; NAD(P)(+) transhydrogenase [B-specific] {ECO:0000256|HAMAP-Rule:MF_00247}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
Soluble pyridine nucleotide transhydrogenase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WAE0_PANSA
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_072_000G1_scaffold_1137_7
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7160..8077)
DNA (918bp) protein (306aa)
OxyR n=5 Tax=Pantoea ananas RepID=D4GDW4_PANAM
oxyR; hydrogen peroxide-inducible genes activator OxyR
Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:CRH31357.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
L3_072_000G1_scaffold_1137_8
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8204..8938
DNA (735bp) protein (245aa)
aHP1; peroxiredoxin/glutaredoxin family protein (EC:1.11.1.15)
Glutaredoxin-family domain containing protein n=1 Tax=Pantoea sp. GM01 RepID=J3DK63_9ENTR
Glutathione peroxidase {ECO:0000313|EMBL:KKD30644.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L3_072_000G1_scaffold_1137_9
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9056..10429)
DNA (1374bp) protein (458aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=69218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus.;"
Argininosuccinate lyase n=4 Tax=Pantoea ananas RepID=D4GDW5_PANAM
argH; argininosuccinate lyase ArgH
L3_072_000G1_scaffold_1137_10
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10517..11734)
DNA (1218bp) protein (406aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
argininosuccinate synthase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002554865
argG; argininosuccinate synthase ArgG
L3_072_000G1_scaffold_1137_11
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11758..12534)
DNA (777bp) protein (259aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
Acetylglutamate kinase n=5 Tax=Pantoea ananas RepID=D4GDW7_PANAM
argB; Acetylglutamate kinase
L3_072_000G1_scaffold_1137_12
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12550..13554)
DNA (1005bp) protein (335aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=5 Tax=Pantoea ananas RepID=D4GDW8_PANAM
argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC
L3_072_000G1_scaffold_1137_13
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13723..14901
DNA (1179bp) protein (393aa)
Acetylornithine deacetylase {ECO:0000256|HAMAP-Rule:MF_01108, ECO:0000256|SAAS:SAAS00063950}; Short=AO {ECO:0000256|HAMAP-Rule:MF_01108};; Short=Acetylornithinase {ECO:0000256|HAMAP-Rule:MF_01108};; EC=3.5.1.16 {ECO:0000256|HAMAP-Rule:MF_01108};; N-acetylornithinase {ECO:0000256|HAMAP-Rule:MF_01108}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
arge1; acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase n=1 Tax=Pantoea sp. Sc1 RepID=H8DIT8_9ENTR
L3_072_000G1_scaffold_1137_14
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15157..17808
DNA (2652bp) protein (884aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SI76_PANVC
L3_072_000G1_scaffold_1137_15
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17961..18677
DNA (717bp) protein (239aa)
Uncharacterized protein yiaF n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SK28_PANVC
Uncharacterized protein {ECO:0000313|EMBL:KKD30662.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yiaF; hypothetical protein
L3_072_000G1_scaffold_1137_16
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19125..21059
DNA (1935bp) protein (645aa)
PTS mannitol transporter subunit IIABC n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1VE30_9ENTR
PTS mannitol transporter subunit IIABC {ECO:0000313|EMBL:ERH65642.1}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
PTS system mannitol-specific transporter subunit IICBA
L3_072_000G1_scaffold_1137_17
Pantoea sp. AS-PWVM4, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21154..22302
DNA (1149bp) protein (383aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1332069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. AS-PWVM4.;"
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2M1S9_9ENTR
mannitol dehydrogenase domain-containing protein
L3_072_000G1_scaffold_1137_18
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22385..22918
DNA (534bp) protein (178aa)
Mannitol repressor protein n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1U5G4_9ENTR
Mannitol repressor protein {ECO:0000313|EMBL:ERH65644.1}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
mtlR; mannitol operon repressor
L3_072_000G1_scaffold_1137_19
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23006..23368
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WI32_PANSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU67411.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_1137_20
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23377..24192)
DNA (816bp) protein (272aa)
Virulence factor VirK n=1 Tax=Pantoea agglomerans 299R RepID=L7C1B8_ENTAG
Virulence factor VirK {ECO:0000313|EMBL:KKD30667.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L3_072_000G1_scaffold_1137_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24233..24313)
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
Displaying 21 items

View Taxonomy