ggKbase home page

L3_072_000G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_48_1
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..1954)
DNA (1686bp) protein (562aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hutU; urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Pantoea sp. Sc1 RepID=H8DR70_9ENTR
L3_072_000G1_scaffold_48_2
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1965..3524)
DNA (1560bp) protein (520aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6W9R0_PANSA
L3_072_000G1_scaffold_48_3
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3789..4544
DNA (756bp) protein (252aa)
Histidine utilization repressor n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHP9_PANVC
hutC; histidine utilization repressor
Histidine utilization repressor {ECO:0000313|EMBL:ADO08848.1}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
L3_072_000G1_scaffold_48_4
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4528..5067)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Pantoea sp. GM01 RepID=J2LZ79_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EJL90703.1}; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
HutD family protein
L3_072_000G1_scaffold_48_5
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5064..6419)
DNA (1356bp) protein (452aa)
hutF; formiminoglutamate deiminase (EC:3.5.3.13)
Formiminoglutamate deiminase {ECO:0000313|EMBL:ADO08850.1}; EC=3.5.3.13 {ECO:0000313|EMBL:ADO08850.1};; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
Formiminoglutamate deiminase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHQ1_PANVC
L3_072_000G1_scaffold_48_6
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6504..7721
DNA (1218bp) protein (406aa)
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
Imidazolonepropionase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6W9R4_PANSA
L3_072_000G1_scaffold_48_7
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7718..8509
DNA (792bp) protein (264aa)
N-formylglutamate amidohydrolase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6W9R5_PANSA
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ADU68562.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_48_8
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8527..9159)
DNA (633bp) protein (211aa)
Asp/Glu/hydantoin racemase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553B8B
hypothetical protein
Asp/Glu/hydantoin racemase {ECO:0000313|EMBL:KDA95259.1}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
L3_072_000G1_scaffold_48_9
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9301..10221
DNA (921bp) protein (307aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=706191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananatis (strain LMG 20103).;"
23S rRNA methyltransferase n=1 Tax=Pantoea ananatis BRT175 RepID=U4W983_PANAN
ybiN; hypothetical protein
L3_072_000G1_scaffold_48_10
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10224..12494)
DNA (2271bp) protein (757aa)
Potassium efflux system KefA protein n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2MNP2_9ENTR
Mechanosensitive channel protein {ECO:0000313|EMBL:KKD34375.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
mechanosensitive ion channel protein MscS
L3_072_000G1_scaffold_48_11
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12664..13146)
DNA (483bp) protein (161aa)
ABC transporter related protein n=2 Tax=Pantoea RepID=E6WB03_PANSA
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADU68571.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_48_12
Pantoea sp. AS-PWVM4, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13195..13386)
DNA (192bp) protein (64aa)
ABC transporter related protein n=2 Tax=Pantoea RepID=E6WB03_PANSA
ABC transporter-like protein
Glutamate transport ATP-binding protein {ECO:0000313|EMBL:ERK18424.1}; TaxID=1332069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. AS-PWVM4.;"
L3_072_000G1_scaffold_48_13
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13383..14042)
DNA (660bp) protein (220aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=2 Tax=Pantoea RepID=J3DF48_9ENTR
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADU68572.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_48_14
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14117..14863)
DNA (747bp) protein (249aa)
Glutamine-binding periplasmic protein GlnH n=3 Tax=Pantoea ananas RepID=F2EPI3_PANAA
glnH; glutamine-binding periplasmic protein precursor GlnH
Glutamine ABC transporter substrate-bindnig protein {ECO:0000313|EMBL:KHN62294.1}; TaxID=66269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;"
L3_072_000G1_scaffold_48_15
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15186..15689)
DNA (504bp) protein (168aa)
DNA protection during starvation protein {ECO:0000256|HAMAP-Rule:MF_01441, ECO:0000256|SAAS:SAAS00013554}; EC=1.16.-.- {ECO:0000256|HAMAP-Rule:MF_01441, ECO:0000256|SAAS:SAAS00013562};; TaxID=66269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;"
DNA protection during starvation protein n=5 Tax=Pantoea ananas RepID=D4GN98_PANAM
dps; DNA protection during starvation protein Dps
L3_072_000G1_scaffold_48_16
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16018..16929)
DNA (912bp) protein (304aa)
Putative DMT superfamily metabolite efflux protein n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2MNP8_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU68575.1}; Flags: Precursor;; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_48_17
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17305..17817
DNA (513bp) protein (171aa)
Outer membrane protein X n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VR39_ENTAG
Membrane protein {ECO:0000313|EMBL:KJH59303.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
ompX; outer membrane protein X
L3_072_000G1_scaffold_48_18
Pantoea sp. aB, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18011..18205)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Pantoea RepID=L7BU92_ENTAG
Putative uncharacterized protein {ECO:0000313|EMBL:EFM19520.1}; TaxID=517433 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. aB.;"
hypothetical protein
L3_072_000G1_scaffold_48_19
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18472..18933
DNA (462bp) protein (154aa)
MntR n=5 Tax=Pantoea ananas RepID=D4GNA2_PANAM
mntR; transcriptional regulator MntR
Manganese transporter {ECO:0000313|EMBL:KKD33848.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L3_072_000G1_scaffold_48_20
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18951..20060
DNA (1110bp) protein (370aa)
46 kDa membrane protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHR9_PANVC
ybiR; hypothetical protein
46 kDa membrane protein {ECO:0000313|EMBL:ADO08868.1}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
L3_072_000G1_scaffold_48_21
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20207..21346
DNA (1140bp) protein (380aa)
Multidrug resistance protein A n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHS0_PANVC
EmrA {ECO:0000313|EMBL:KKD33846.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
emra1; multidrug resistance protein A
L3_072_000G1_scaffold_48_22
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21343..22911
DNA (1569bp) protein (523aa)
Multidrug resistance protein B n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHS1_PANVC
emrb1; multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:ADO08870.1}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
L3_072_000G1_scaffold_48_23
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22913..24448
DNA (1536bp) protein (512aa)
RND transporter n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VR35_ENTAG
RND transporter {ECO:0000313|EMBL:KKD33844.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
RND efflux system, outer membrane protein
L3_072_000G1_scaffold_48_24
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24727..26211
DNA (1485bp) protein (495aa)
Sugar transporter n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WB15_PANSA
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ADU68583.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_48_25
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26639..27040
DNA (402bp) protein (134aa)
DNA-binding protein n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1V3X1_9ENTR
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
histone family protein nucleoid-structuring protein H-NS
L3_072_000G1_scaffold_48_26
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27216..28808
DNA (1593bp) protein (531aa)
ABC transporter related protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WB17_PANSA
ABC transporter-like protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKD33842.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L3_072_000G1_scaffold_48_27
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29101..29853)
DNA (753bp) protein (251aa)
molybdopterin-synthase adenylyltransferase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553B98
Molybdopterin-synthase adenylyltransferase {ECO:0000313|EMBL:KJH59295.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
moeB; molybdopterin biosynthesis protein moeB
L3_072_000G1_scaffold_48_28
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29853..31088)
DNA (1236bp) protein (412aa)
Molybdopterin biosynthesis protein MoeA n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VNC0_ENTAG
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:KKD33840.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
moeA; molybdopterin biosynthesis protein moeA
L3_072_000G1_scaffold_48_29
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31314..32273
DNA (960bp) protein (320aa)
ybiK; asparaginase (EC:3.5.1.1)
isoaspartyl peptidase n=1 Tax=Enterobacter agglomerans RepID=UPI00026D25BE
Isoaspartyl peptidase {ECO:0000313|EMBL:KKB04627.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
L3_072_000G1_scaffold_48_30
Pantoea rodasii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32283..34130
DNA (1848bp) protein (616aa)
Dipeptide transport ATP-binding protein DppD n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2M5J9_9ENTR
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHJ65546.1}; TaxID=1076549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea rodasii.;"
oligopeptide/dipeptide ABC transporter ATPase
Displaying items 1-30 of 148 in total

View Taxonomy