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L3_072_000G1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_58_1
unknown

Not on your lists

485..2371
DNA (1887bp) protein (629aa)

This feature has no annotations

L3_072_000G1_scaffold_58_2
unknown

Not on your lists

2775..2975
DNA (201bp) protein (67aa)

This feature has no annotations

L3_072_000G1_scaffold_58_3
Klebsiella phage F19, Caudovirales, Viruses

Not on your lists

2953..3573
DNA (621bp) protein (207aa)
Endolysin n=1 Tax=Klebsiella phage KP34 RepID=D1L301_9CAUD
Endolysin {ECO:0000313|EMBL:AHC30416.1}; TaxID=1416011 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Klebsiella phage F19.;"
L3_072_000G1_scaffold_58_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3603..4502)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7KNG8_PECCC
Uncharacterized protein {ECO:0000313|EMBL:CDL64637.1}; TaxID=1432561 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS39.;"
hypothetical protein
L3_072_000G1_scaffold_58_5
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4667..5953)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0003714B59
RNA-directed DNA polymerase {ECO:0000313|EMBL:EUD05816.1}; TaxID=1256989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia alcalifaciens R90-1475.;"
hypothetical protein
L3_072_000G1_scaffold_58_6
unknown

Not on your lists

6101..6262
DNA (162bp) protein (54aa)

This feature has no annotations

L3_072_000G1_scaffold_58_7
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6533..7285
DNA (753bp) protein (251aa)
Uncharacterized protein n=15 Tax=Escherichia coli RepID=B7LD23_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIX56946.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_072_000G1_scaffold_58_8
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..8368)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Serratia plymuthica PRI-2C RepID=I3AF81_SERPL
Uncharacterized protein {ECO:0000313|EMBL:AKF38573.1}; TaxID=630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica.;"
Hypothetical protein
L3_072_000G1_scaffold_58_9
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8551..8913
DNA (363bp) protein (121aa)
Probable phosphatase Pat9b_1559 {ECO:0000256|HAMAP-Rule:MF_01561}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01561};; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
Probable phosphatase Pat9b_1559 n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WBA7_PANSA
PHP domain-containing protein
L3_072_000G1_scaffold_58_10
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8937..9503
DNA (567bp) protein (189aa)
Molecular chaperone n=2 Tax=root RepID=U4VML7_ENTAG
ycdY; hypothetical protein
Molecular chaperone {ECO:0000313|EMBL:KDA95564.1}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
L3_072_000G1_scaffold_58_11
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9515..10879)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SAD4_PANVC
CAIB/BAIF family CoA transferase {ECO:0000313|EMBL:KKD32916.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
caiB; hypothetical protein
L3_072_000G1_scaffold_58_12
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10927..11781)
DNA (855bp) protein (285aa)
Putative membrane protein n=1 Tax=Pantoea sp. GM01 RepID=J3D4L4_9ENTR
multidrug DMT transporter permease
Putative membrane protein {ECO:0000313|EMBL:EJL84574.1}; Flags: Precursor;; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
L3_072_000G1_scaffold_58_13
Pantoea sp. aB, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11994..12722
DNA (729bp) protein (243aa)
guaa1; GMP synthase (EC:6.3.-.-)
Glutamine amidotransferase class-I n=2 Tax=Pantoea RepID=E0LZ65_9ENTR
Glutamine amidotransferase class-I {ECO:0000313|EMBL:EFM19810.1}; TaxID=517433 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. aB.;"
L3_072_000G1_scaffold_58_14
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12710..13273)
DNA (564bp) protein (188aa)
Trans-aconitate 2-methyltransferase n=1 Tax=Pantoea sp. Sc1 RepID=H8DNS5_9ENTR
Methyltransferase {ECO:0000313|EMBL:KKB04884.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
trans-aconitate 2-methyltransferase
L3_072_000G1_scaffold_58_15
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13508..15028
DNA (1521bp) protein (507aa)
Aldehyde dehydrogenase B {ECO:0000313|EMBL:EHU00377.1}; EC=1.-.-.- {ECO:0000313|EMBL:EHU00377.1};; EC=1.2.1.- {ECO:0000313|EMBL:EHU00377.1};; TaxID=660596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii subsp. stewartii DC283.;"
Aldehyde dehydrogenase B n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RE34_ERWST
aldB; aldehyde dehydrogenase
L3_072_000G1_scaffold_58_16
unknown

Not on your lists

15209..15376
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000G1_scaffold_58_17
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15592..17238)
DNA (1647bp) protein (549aa)
Fumarate hydratase n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TSG5_9ENTR
Fumarate hydratase {ECO:0000313|EMBL:ERH67160.1}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
fumarate hydratase
L3_072_000G1_scaffold_58_18
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17393..18907)
DNA (1515bp) protein (505aa)
Anion transporter n=1 Tax=Pantoea sp. GM01 RepID=J2KX18_9ENTR
Anion transporter {ECO:0000313|EMBL:EJL84580.1}; Flags: Precursor;; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
citrate:succinate antiporter
L3_072_000G1_scaffold_58_19
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19479..22256
DNA (2778bp) protein (926aa)
NADH:flavin oxidoreductase n=1 Tax=Pantoea sp. Sc1 RepID=H8DTW5_9ENTR
NADH:flavin oxidoreductase {ECO:0000313|EMBL:KKD31408.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yqiG; NADH-dependent flavin oxidoreductase YqiG
L3_072_000G1_scaffold_58_20
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22335..23309
DNA (975bp) protein (325aa)
ApbE family lipoprotein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WBD1_PANSA
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ADU68900.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_072_000G1_scaffold_58_21
Pantoea sp. AS-PWVM4, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23290..24009)
DNA (720bp) protein (240aa)
Transcriptional regulatory protein n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2LWE3_9ENTR
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1332069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. AS-PWVM4.;"
response regulator receiver and unknown domain-containing protein
L3_072_000G1_scaffold_58_22
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24006..25619)
DNA (1614bp) protein (538aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WBD3_PANSA
signal transduction histidine kinase regulating citrate/malate metabolism
L3_072_000G1_scaffold_58_23
Pantoea sp. PSNIH1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26161..27252)
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SAI4_PANVC
ychF; GTP-binding protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1484158 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH1.;"
L3_072_000G1_scaffold_58_24
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27355..27942)
DNA (588bp) protein (196aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=66269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;"
Peptidyl-tRNA hydrolase n=3 Tax=Pantoea ananas RepID=G7UJ48_PANAN
pth; Peptidyl-tRNA hydrolase
L3_072_000G1_scaffold_58_25
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28245..28475
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=2 Tax=Pantoea RepID=E0LZX2_9ENTR
Membrane protein {ECO:0000313|EMBL:KDA95622.1}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
ychH; hypothetical protein
L3_072_000G1_scaffold_58_26
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28535..29473)
DNA (939bp) protein (313aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
Ribose-phosphate pyrophosphokinase n=9 Tax=Pantoea RepID=D4GCY2_PANAM
prs; ribose-phosphate pyrophosphokinase Prs
L3_072_000G1_scaffold_58_27
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29620..30477)
DNA (858bp) protein (286aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TCI9_9ENTR
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_072_000G1_scaffold_58_28
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30474..31097)
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=1 Tax=Pantoea sp. Sc1 RepID=H8DMY9_9ENTR
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hemM; outer-membrane lipoprotein hemM
L3_072_000G1_scaffold_58_29
Pantoea sp. YR343, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31314..32570
DNA (1257bp) protein (419aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1144341 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. YR343.;"
Glutamyl-tRNA reductase n=1 Tax=Pantoea sp. YR343 RepID=J3BZ76_9ENTR
glutamyl-tRNA reductase
L3_072_000G1_scaffold_58_30
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32614..33696
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=5 Tax=Pantoea ananas RepID=D4GCY6_PANAM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
prfA; peptide chain release factor 1 PrfA
Displaying items 1-30 of 148 in total

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