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L3_072_000G1_scaffold_2240

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_2240_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(278..1495)
DNA (1218bp) protein (406aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNH4_9FIRM
L3_072_000G1_scaffold_2240_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1986..2828
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79778.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rpiR; RpiR transcriptional regulator
L3_072_000G1_scaffold_2240_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2844..3506
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ63_9FIRM
ribulose-phosphate 3-epimerase
L3_072_000G1_scaffold_2240_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3508..5028
DNA (1521bp) protein (507aa)
Xylulokinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPC0_9FIRM
Xylulokinase {ECO:0000313|EMBL:CDD79776.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xylulokinase
L3_072_000G1_scaffold_2240_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5071..6021
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79775.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
periplasmic binding protein/LacI transcriptional regulator
L3_072_000G1_scaffold_2240_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6109..7602
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79774.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter related protein
L3_072_000G1_scaffold_2240_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7608..8594
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79773.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
inner-membrane translocator
L3_072_000G1_scaffold_2240_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8628..9188
DNA (561bp) protein (187aa)
3-hexulose-6-phosphate isomerase (EC:5.3.1.27)
3-hexulose-6-phosphate isomerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ59_9FIRM
3-hexulose-6-phosphate isomerase {ECO:0000313|EMBL:CDD79772.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_2240_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9198..10025
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79770.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xylose isomerase
L3_072_000G1_scaffold_2240_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10318..11340
DNA (1023bp) protein (341aa)
HflK protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDB6_9FIRM
HflK protein {ECO:0000313|EMBL:EES77165.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HflK protein
L3_072_000G1_scaffold_2240_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11428..12294
DNA (867bp) protein (289aa)
Protein HflC n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDB5_9FIRM
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_2240_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12539..12616
DNA (78bp) protein (26aa)
Putative uncharacterized protein n=2 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WLP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75403.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
Displaying 12 items

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