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L3_072_000G1_scaffold_2563

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_2563_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(118..870)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79357.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protease subunit of ATP-dependent Clp proteases
L3_072_000G1_scaffold_2563_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(981..1712)
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein RSAG_00642 n=2 Tax=Ruminococcus RepID=C6J8N3_9FIRM
Probable transcriptional regulatory protein BN806_00281 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR01033
L3_072_000G1_scaffold_2563_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1754..3067)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78686.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Hemolysins and related proteins containing CBS domains
L3_072_000G1_scaffold_2563_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3268..3615)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
mRNA interferase n=2 Tax=Ruminococcus RepID=C6J8N5_9FIRM
Growth inhibitor
L3_072_000G1_scaffold_2563_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3801..4946)
DNA (1146bp) protein (382aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N6_9FIRM
L3_072_000G1_scaffold_2563_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5024..6523)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78689.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L3_072_000G1_scaffold_2563_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6613..7260)
DNA (648bp) protein (216aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPH8_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CoA-binding protein
L3_072_000G1_scaffold_2563_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7521..9431
DNA (1911bp) protein (637aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79370.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_072_000G1_scaffold_2563_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9549..10757)
DNA (1209bp) protein (403aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=2 Tax=Ruminococcus RepID=C6J8P0_9FIRM
Displaying 9 items

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