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L3_072_000G1_scaffold_1613

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_1613_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(209..2008)
DNA (1800bp) protein (600aa)
LPXTG-containing cell wall anchor protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEK2_9FIRM
LPXTG-containing cell wall anchor protein {ECO:0000313|EMBL:EES76623.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved repeat domain
L3_072_000G1_scaffold_1613_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2700..3632
DNA (933bp) protein (311aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEK1_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_1613_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3796..5931)
DNA (2136bp) protein (712aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEK0_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EES76621.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_1613_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6052..7023)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76620.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_1613_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7312..8319
DNA (1008bp) protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Ruminococcus RepID=C6JEJ8_9FIRM
L3_072_000G1_scaffold_1613_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8428..8853
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76027.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_1613_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8932..9882)
DNA (951bp) protein (317aa)
Sodium Bile acid symporter family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFC0_9FIRM
Sodium Bile acid symporter family protein {ECO:0000313|EMBL:CDD76028.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted Na+-dependent transporter
L3_072_000G1_scaffold_1613_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9884..10624)
DNA (741bp) protein (247aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEJ5_9FIRM
Polar amino acid ABC transporter {ECO:0000313|EMBL:CDD76029.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_1613_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10614..11321)
DNA (708bp) protein (236aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYN8_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EQM98771.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid ABC transporter permease
L3_072_000G1_scaffold_1613_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11392..12180)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LW37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98772.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_072_000G1_scaffold_1613_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12515..13366
DNA (852bp) protein (284aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE80_9FIRM
L3_072_000G1_scaffold_1613_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13495..13812)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76613.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Branched-chain amino acid transport protein (AzlD).
L3_072_000G1_scaffold_1613_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13802..14527)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76612.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L3_072_000G1_scaffold_1613_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14660..15664)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76035.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Listeria-Bacteroides repeat domain (List_Bact_rpt).
L3_072_000G1_scaffold_1613_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15812..16234)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76036.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fe2+/Zn2+ uptake regulation proteins
L3_072_000G1_scaffold_1613_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16180..16344)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LVD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98774.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_1613_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16289..17143)
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76037.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying 17 items

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