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L3_072_000G1_scaffold_406

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_406_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

234..1433
DNA (1200bp) protein (400aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77738.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_406_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1549..2583
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78123.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Molybdopterin biosynthesis enzyme
L3_072_000G1_scaffold_406_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2642..3451
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78124.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted phosphohydrolases
L3_072_000G1_scaffold_406_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3519..4310
DNA (792bp) protein (264aa)
Segregation and condensation protein A n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAU8_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_406_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4354..4923
DNA (570bp) protein (190aa)
Segregation and condensation protein B n=2 Tax=Ruminococcus RepID=C6JAU7_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
segregation and condensation protein B
L3_072_000G1_scaffold_406_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4943..5737
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78128.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_406_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5917..7149
DNA (1233bp) protein (411aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78130.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_406_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7405..8190
DNA (786bp) protein (262aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK56_9FIRM
L3_072_000G1_scaffold_406_9
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8505..9842
DNA (1338bp) protein (446aa)
Heavy metal-associated domain protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LW93_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:CDB78247.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
heavy metal transport/detoxification protein
L3_072_000G1_scaffold_406_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9860..10372
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY99126.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_072_000G1_scaffold_406_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10466..11374)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIT0_9FIRM
LysR family transcriptional regulator {ECO:0000313|EMBL:CDD78134.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LysR family transcriptional regulator
L3_072_000G1_scaffold_406_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11673..12515
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78136.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Xylose isomerase-like TIM barrel.
L3_072_000G1_scaffold_406_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12645..14570
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78137.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_072_000G1_scaffold_406_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14799..15683
DNA (885bp) protein (295aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLB4_9FIRM
L3_072_000G1_scaffold_406_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15704..16903
DNA (1200bp) protein (400aa)
MFS transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E88437
Uncharacterized protein {ECO:0000313|EMBL:CDD78139.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Arabinose efflux permease
L3_072_000G1_scaffold_406_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17195..18553
DNA (1359bp) protein (453aa)
membrane protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FB276E
Uncharacterized protein {ECO:0000313|EMBL:EES77724.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_406_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18734..19495)
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAS5_9FIRM
L3_072_000G1_scaffold_406_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19764..20642)
DNA (879bp) protein (293aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAS4_9FIRM
aroE; shikimate 5-dehydrogenase
L3_072_000G1_scaffold_406_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20682..22679)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78143.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_072_000G1_scaffold_406_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23343..24779
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77708.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_406_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24794..25549
DNA (756bp) protein (252aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJC9_9FIRM
sodium pump decarboxylases, gamma subunit
L3_072_000G1_scaffold_406_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25577..25945
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77706.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acetyl/propionyl-CoA carboxylase, alpha subunit
L3_072_000G1_scaffold_406_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25962..27110
DNA (1149bp) protein (383aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=2 Tax=Ruminococcus RepID=C6JAR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78148.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_406_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27136..28548
DNA (1413bp) protein (471aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77704.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_406_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28660..30120
DNA (1461bp) protein (487aa)
HI0933 family flavoprotein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAR6_9FIRM
HI0933 family flavoprotein {ECO:0000313|EMBL:EES77703.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved hypothetical protein TIGR00275
L3_072_000G1_scaffold_406_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30306..30977
DNA (672bp) protein (224aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAR5_9FIRM
L3_072_000G1_scaffold_406_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30996..31874
DNA (879bp) protein (293aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKJ4_9FIRM
L3_072_000G1_scaffold_406_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31855..32931
DNA (1077bp) protein (359aa)
Ribosomal protein S1 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAR4_9FIRM
Ribosomal protein S1 {ECO:0000313|EMBL:EES77701.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ribosomal protein S1
L3_072_000G1_scaffold_406_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32971..33825
DNA (855bp) protein (285aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77342.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_406_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33966..34745
DNA (780bp) protein (260aa)
Exopolysaccharide tyrosine-protein kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ50_9FIRM
Exopolysaccharide tyrosine-protein kinase {ECO:0000313|EMBL:CDD77343.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Capsular polysaccharide biosynthesis protein
Displaying items 1-30 of 48 in total

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