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L3_072_000G1_scaffold_767

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_767_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(104..1723)
DNA (1620bp) protein (540aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=2 Tax=Ruminococcus RepID=C6JFC3_9FIRM
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EES76106.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_767_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1893..2975)
DNA (1083bp) protein (361aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Ruminococcus RepID=C6JFC4_9FIRM
6-phosphofructokinase 1 {ECO:0000313|EMBL:CDD79624.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_767_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3662..5029)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFC5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES76108.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L3_072_000G1_scaffold_767_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5138..5800)
DNA (663bp) protein (221aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFC6_9FIRM
Cytosine/adenosine deaminases
L3_072_000G1_scaffold_767_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5949..6992
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79618.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_767_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6963..7658)
DNA (696bp) protein (232aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79616.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_767_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7830..9170)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76112.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_767_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9364..9651)
DNA (288bp) protein (96aa)
Putative septation protein SpoVG n=2 Tax=Ruminococcus RepID=C6JFD0_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein, involved in the regulation of septum location
L3_072_000G1_scaffold_767_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9701..10819)
DNA (1119bp) protein (373aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=2 Tax=Ruminococcus RepID=C6JFD1_9FIRM
L3_072_000G1_scaffold_767_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10819..12093)
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Ruminococcus RepID=C6JFD2_9FIRM
L3_072_000G1_scaffold_767_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12487..13866
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Ruminococcus RepID=C6JFD3_9FIRM
L3_072_000G1_scaffold_767_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14614..15768
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CND1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DnaD and phage-associated domain
L3_072_000G1_scaffold_767_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15837..16820
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79461.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
replicative DNA helicase loader DnaI
L3_072_000G1_scaffold_767_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16824..18011
DNA (1188bp) protein (396aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Ruminococcus RepID=C6JFD6_9FIRM
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EES76119.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_767_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18175..19545)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79463.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_767_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19511..20563)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CML9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79464.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA repair exonuclease
L3_072_000G1_scaffold_767_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20648..22039)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=2 Tax=Ruminococcus RepID=C6JFD9_9FIRM
L3_072_000G1_scaffold_767_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22251..24662)
DNA (2412bp) protein (804aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76123.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Listeria-Bacteroides repeat domain (List_Bact_rpt).
L3_072_000G1_scaffold_767_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24856..26346)
DNA (1491bp) protein (497aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFE1_9FIRM
L3_072_000G1_scaffold_767_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26560..29013)
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79886.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_767_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29010..30173)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79887.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_767_22
unknown

Not on your lists

comp(30133..30294)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_072_000G1_scaffold_767_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30261..30629)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79888.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_767_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30739..31437)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
MTA/SAH nucleosidase n=2 Tax=Ruminococcus RepID=C6JFE5_9FIRM
L3_072_000G1_scaffold_767_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31806..32051
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76129.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_767_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32201..33817)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75981.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
Displaying 26 items

View Taxonomy