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L3_072_000G1_scaffold_854

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_854_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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220..795
DNA (576bp) protein (192aa)
MFS transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030D9B7F
Uncharacterized protein {ECO:0000313|EMBL:EEG95574.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_072_000G1_scaffold_854_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

829..1305
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76353.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acetyltransferases
L3_072_000G1_scaffold_854_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1466..2050)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76352.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cytidylate kinase
L3_072_000G1_scaffold_854_4
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2347..2796)
DNA (450bp) protein (150aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NGN1_9FIRM
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CDC11313.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
transcriptional regulator, BadM/Rrf2 family
L3_072_000G1_scaffold_854_5
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3119..3745
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPV0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18601.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_072_000G1_scaffold_854_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3667..4314)
DNA (648bp) protein (216aa)
Transcriptional regulator n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LRE7_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL23355.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_000G1_scaffold_854_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4483..5253
DNA (771bp) protein (257aa)
carbon monoxide dehydrogenase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F70A84
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EDM86822.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
CO dehydrogenase maturation factor
L3_072_000G1_scaffold_854_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5339..6271
DNA (933bp) protein (311aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTZ6_9FIRM
MoxR-like ATPases
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDM86823.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_072_000G1_scaffold_854_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6278..8095
DNA (1818bp) protein (606aa)
Nitric oxide reductase activation protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LRF0_9FIRM
Nitric oxide reductase activation protein
Nitric oxide reductase activation protein {ECO:0000313|EMBL:CBL23358.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_000G1_scaffold_854_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8112..8306
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R7JV77_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23359.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_072_000G1_scaffold_854_11
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8364..8969
DNA (606bp) protein (202aa)
CO dehydrogenase maturation factor n=1 Tax=Blautia sp. CAG:52 RepID=R6H5T4_9FIRM
CO dehydrogenase maturation factor {ECO:0000313|EMBL:CDB21657.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
CO dehydrogenase maturation factor
L3_072_000G1_scaffold_854_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9173..9877
DNA (705bp) protein (235aa)
LytTR family transcriptional regulator n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030B6402
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDM86827.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Response regulator of the LytR/AlgR family
L3_072_000G1_scaffold_854_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9901..11208
DNA (1308bp) protein (436aa)
histidine kinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000370F1FA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Putative sensor histidine kinase VirS {ECO:0000313|EMBL:EDM86828.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_072_000G1_scaffold_854_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11392..14253
DNA (2862bp) protein (954aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL23363.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL23363.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
beta-glucosidase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E63B5C
L3_072_000G1_scaffold_854_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14280..16718
DNA (2439bp) protein (813aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL23364.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL23364.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
beta-glucosidase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F71378
L3_072_000G1_scaffold_854_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16715..17305
DNA (591bp) protein (197aa)
cell wall integrity and stress response component 3 n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003184A1C
Uncharacterized protein {ECO:0000313|EMBL:EDM86831.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_072_000G1_scaffold_854_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17344..17517
DNA (174bp) protein (58aa)
Transcriptional regulator, LysR family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBA3_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEC89978.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Transcriptional regulator
L3_072_000G1_scaffold_854_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17686..18711)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76557.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, LacI family
L3_072_000G1_scaffold_854_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18930..19868
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEZ2_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD76558.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_854_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19881..20774
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76338.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_854_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20794..22473
DNA (1680bp) protein (560aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF33_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD76560.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_072_000G1_scaffold_854_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22505..23989
DNA (1485bp) protein (495aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY9_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EES76336.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_854_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24060..24275
DNA (216bp) protein (72aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76335.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_854_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24355..26871)
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76563.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent transcriptional regulator-like protein
L3_072_000G1_scaffold_854_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27159..28118
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76333.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_072_000G1_scaffold_854_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28103..28849
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76332.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved hypothetical protein
L3_072_000G1_scaffold_854_27
unknown

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29254..29886
DNA (633bp) protein (211aa)
tail protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FAEF67
L3_072_000G1_scaffold_854_28
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29831..31060
DNA (1230bp) protein (410aa)
tail protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FAEF67
Uncharacterized protein {ECO:0000313|EMBL:CDB77616.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Displaying 28 items

View Taxonomy