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L3_072_000G1_scaffold_855

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_855_1
Lactococcus raffinolactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1..141)
DNA (141bp) protein (47aa)
Type I restriction-modification system,specificity subunit S {ECO:0000313|EMBL:CCK19713.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CCK19713.1};; TaxID=1215915 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus raffinolactis 4877.;"
type I restriction-modification system specificity subunit n=1 Tax=Lactobacillus versmoldensis RepID=UPI0002491CDD
Type I restriction modification DNA specificity domain protein
L3_072_000G1_scaffold_855_2
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145..1743)
DNA (1599bp) protein (533aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EEG37864.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EEG37864.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Type I restriction-modification system, M subunit n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES73_9FIRM
type I restriction-modification system methylation subunit
L3_072_000G1_scaffold_855_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1919..3871)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76035.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_072_000G1_scaffold_855_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3968..4837)
DNA (870bp) protein (290aa)
DegV family EDD domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG55_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EES76034.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EDD domain protein, DegV family
L3_072_000G1_scaffold_855_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5015..6205)
DNA (1191bp) protein (397aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal processing peptidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG54_9FIRM
C-terminal processing peptidase {ECO:0000313|EMBL:EES76033.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_855_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6286..7191)
DNA (906bp) protein (302aa)
Cell division protein FtsX n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG53_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cell division protein FtsX
L3_072_000G1_scaffold_855_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7181..7864)
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG52_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EES76031.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cell division ATP-binding protein FtsE
L3_072_000G1_scaffold_855_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8164..9252)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79830.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, CdaR family
L3_072_000G1_scaffold_855_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9399..10271)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79829.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_855_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10430..10795)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76028.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_072_000G1_scaffold_855_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10820..12718)
DNA (1899bp) protein (633aa)
OPT family oligopeptide transporter n=2 Tax=Ruminococcus RepID=C6JG48_9FIRM
OPT family oligopeptide transporter {ECO:0000313|EMBL:EES76027.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative oligopeptide transporter, OPT family
L3_072_000G1_scaffold_855_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12897..14696)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76026.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Nitric oxide reductase activation protein
L3_072_000G1_scaffold_855_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14680..15600)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76025.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
MoxR-like ATPases
L3_072_000G1_scaffold_855_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15717..17837)
DNA (2121bp) protein (707aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79821.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_855_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17839..18789)
DNA (951bp) protein (317aa)
YegS//BmrU family lipid kinase n=2 Tax=Ruminococcus RepID=C6JG44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79819.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_072_000G1_scaffold_855_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19411..20205
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79001.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_072_000G1_scaffold_855_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20333..21112)
DNA (780bp) protein (260aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG41_9FIRM
L3_072_000G1_scaffold_855_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21105..22289)
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL84_9FIRM
L3_072_000G1_scaffold_855_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22352..22990)
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG39_9FIRM
L3_072_000G1_scaffold_855_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23021..23860)
DNA (840bp) protein (280aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG38_9FIRM
L3_072_000G1_scaffold_855_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23921..24931)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG37_9FIRM
L3_072_000G1_scaffold_855_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24924..25502)
DNA (579bp) protein (193aa)
anthranilate synthase, component II (EC:4.1.3.27)
anthranilate synthase subunit II n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F03A05
Uncharacterized protein {ECO:0000313|EMBL:CDD78995.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_855_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25499..27028)
DNA (1530bp) protein (510aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate/para-aminobenzoate synthase component I n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL80_9FIRM
Anthranilate/para-aminobenzoate synthase component I {ECO:0000313|EMBL:CDD78994.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_072_000G1_scaffold_855_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27574..29034)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNI3_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:EES76013.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uracil-xanthine permease
L3_072_000G1_scaffold_855_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29300..29665)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76012.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_072_000G1_scaffold_855_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29908..31032)
DNA (1125bp) protein (375aa)
IS605 OrfB family transposase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD79_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EES77128.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transposase, IS605 OrfB family, central region
Displaying 26 items

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