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L3_072_000G1_scaffold_1525

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_1525_1
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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122..391
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=11 Tax=Lactobacillus reuteri RepID=RS15_LACRD
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_1525_2
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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572..2353
DNA (1782bp) protein (594aa)
Beta-lactamase domain protein n=6 Tax=Lactobacillus reuteri RepID=A5VJ90_LACRD
metallo-beta-lactamase superfamily protein
Metallo-beta-lactamase superfamily hydrolase {ECO:0000313|EMBL:AAX14548.1}; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
L3_072_000G1_scaffold_1525_3
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2470..3375
DNA (906bp) protein (302aa)
Uncharacterized protein n=4 Tax=Lactobacillus reuteri RepID=C0Z0W1_LACRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI08509.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_1525_4
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3554..4744
DNA (1191bp) protein (397aa)
Elongation factor Tu n=11 Tax=Lactobacillus reuteri RepID=EFTU_LACRD
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1340495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri I5007.;"
L3_072_000G1_scaffold_1525_5
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4940..6250
DNA (1311bp) protein (437aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=491077 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain ATCC 55730 / SD2112).;"
Trigger factor n=10 Tax=Lactobacillus reuteri RepID=TIG_LACRD
L3_072_000G1_scaffold_1525_6
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6426..7676
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=5 Tax=Lactobacillus reuteri RepID=CLPX_LACRD
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
L3_072_000G1_scaffold_1525_7
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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7694..8284
DNA (591bp) protein (197aa)
Probable GTP-binding protein EngB n=9 Tax=Lactobacillus reuteri RepID=ENGB_LACRD
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_1525_8
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8244..8585
DNA (342bp) protein (114aa)
mazG; MazG nucleotide pyrophosphohydrolase (EC:3.6.1.19)
MazG nucleotide pyrophosphohydrolase domain protein n=6 Tax=Lactobacillus reuteri RepID=F8DNX4_LACRS
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:AGR64083.1}; TaxID=1358027 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri TD1.;"
L3_072_000G1_scaffold_1525_9
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8629..8766)
DNA (138bp) protein (46aa)
Uncharacterized protein n=6 Tax=Lactobacillus reuteri RepID=S5NDE3_LACRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGR65028.1}; TaxID=1358027 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri TD1.;"
L3_072_000G1_scaffold_1525_10
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8910..10721
DNA (1812bp) protein (604aa)
UvrABC system protein C n=4 Tax=Lactobacillus reuteri RepID=UVRC_LACRD
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
L3_072_000G1_scaffold_1525_11
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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10786..12102
DNA (1317bp) protein (439aa)
GTPase Obg n=4 Tax=Lactobacillus reuteri RepID=OBG_LACRD
GTP-binding protein
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=557433 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain JCM 1112).;"
L3_072_000G1_scaffold_1525_12
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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12135..13064
DNA (930bp) protein (310aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
Ribonuclease Z n=4 Tax=Lactobacillus reuteri RepID=RNZ_LACRD
metal-dependent hydrolase
L3_072_000G1_scaffold_1525_13
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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13061..13915
DNA (855bp) protein (285aa)
Short-chain dehydrogenase/reductase SDR n=4 Tax=Lactobacillus reuteri RepID=A5VJA1_LACRD
short-chain dehydrogenase/reductase SDR
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEI08519.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_1525_14
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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14055..16382
DNA (2328bp) protein (776aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XRP9_LACRE
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDX42200.1}; TaxID=349123 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri 100-23.;"
single-stranded DNA-binding protein
L3_072_000G1_scaffold_1525_15
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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16399..16917
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
Adenine phosphoribosyltransferase n=4 Tax=Lactobacillus reuteri RepID=F8DNY1_LACRS
adenine phosphoribosyltransferase
L3_072_000G1_scaffold_1525_16
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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17028..17642
DNA (615bp) protein (205aa)
membrane protein n=1 Tax=Lactobacillus reuteri RepID=UPI0002F41D26
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:ABI26344.1}; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
L3_072_000G1_scaffold_1525_17
Enterococcus casseliflavus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(17873..18280)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Enterococcus flavescens ATCC 49996 RepID=R2P0Z7_ENTCA
Uncharacterized protein {ECO:0000313|EMBL:EOH76913.1}; TaxID=1158603 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus flavescens ATCC 49996.;"
xerC1; tyrosine recombinase XerC
Displaying 17 items

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