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L3_072_000G1_scaffold_805

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_805_1
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8..1072)
DNA (1065bp) protein (355aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
ABC transporter related n=5 Tax=Lactobacillus reuteri RepID=A5VHY8_LACRD
methionine ABC transporter ATP-binding protein
L3_072_000G1_scaffold_805_2
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1085..1936)
DNA (852bp) protein (284aa)
Lipoprotein n=4 Tax=Lactobacillus reuteri RepID=A5VHY9_LACRD
hypothetical protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_3
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2424..3389
DNA (966bp) protein (322aa)
Putative L-lactate dehydrogenase {ECO:0000313|EMBL:EEI09682.1}; EC=1.1.1.37 {ECO:0000313|EMBL:EEI09682.1};; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
Malate dehydrogenase (NAD) n=4 Tax=Lactobacillus reuteri RepID=A5VHZ0_LACRD
L-2-hydroxyisocaproate dehydrogenase
L3_072_000G1_scaffold_805_4
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3536..4732
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=4 Tax=Lactobacillus reuteri RepID=A5VHZ1_LACRD
multidrug transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEI09683.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_5
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4814..5092)
DNA (279bp) protein (93aa)
FMN-binding domain protein n=3 Tax=Lactobacillus reuteri RepID=A5VHZ2_LACRD
FMN-binding domain-containing protein
FMN-binding domain protein {ECO:0000313|EMBL:EEI09684.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_6
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5119..5760)
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
Endonuclease III n=4 Tax=Lactobacillus reuteri RepID=A5VHZ3_LACRD
endonuclease III
L3_072_000G1_scaffold_805_7
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6058..7530
DNA (1473bp) protein (491aa)
Amino acid transport protein n=4 Tax=Lactobacillus reuteri RepID=B2G5H2_LACRJ
amino acid transport protein
Amino acid permease {ECO:0000313|EMBL:EEI09686.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_8
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7493..8854
DNA (1362bp) protein (454aa)
Aminotransferase {ECO:0000313|EMBL:ABQ82469.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABQ82469.1};; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
4-aminobutyrate aminotransferase n=4 Tax=Lactobacillus reuteri RepID=B2G5H3_LACRJ
4-aminobutyrate aminotransferase
L3_072_000G1_scaffold_805_9
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9137..10306
DNA (1170bp) protein (390aa)
Sodium/proton antiporter NapA, CPA2 family n=4 Tax=Lactobacillus reuteri RepID=A5VHZ6_LACRD
sodium/hydrogen exchanger
Sodium/proton antiporter NapA, CPA2 family {ECO:0000313|EMBL:ABQ82470.1}; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
L3_072_000G1_scaffold_805_10
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10319..12637
DNA (2319bp) protein (773aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
DNA helicase n=4 Tax=Lactobacillus reuteri RepID=B2G5H5_LACRJ
DNA helicase
L3_072_000G1_scaffold_805_11
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12725..13168
DNA (444bp) protein (148aa)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:ABQ82472.1}; EC=2.7.4.6 {ECO:0000313|EMBL:ABQ82472.1};; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
Nucleoside diphosphate kinase n=4 Tax=Lactobacillus reuteri RepID=A5VHZ8_LACRD
nucleoside-diphosphate kinase
L3_072_000G1_scaffold_805_12
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13220..14179)
DNA (960bp) protein (320aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
DNA methylase N-4/N-6 domain protein n=5 Tax=Lactobacillus reuteri RepID=A5VHZ9_LACRD
hypothetical protein
L3_072_000G1_scaffold_805_13
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14457..15479
DNA (1023bp) protein (341aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
Tryptophan--tRNA ligase n=4 Tax=Lactobacillus reuteri RepID=A5VI00_LACRD
tryptophanyl-tRNA synthetase II
L3_072_000G1_scaffold_805_14
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15623..16564
DNA (942bp) protein (314aa)
Exopolyphosphatase n=3 Tax=Lactobacillus reuteri RepID=R9WME2_LACRE
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AGN99960.1}; TaxID=1340495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri I5007.;"
L3_072_000G1_scaffold_805_15
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16557..17819
DNA (1263bp) protein (421aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=4 Tax=Lactobacillus reuteri RepID=A5VI02_LACRD
3-hydroxy-3-methylglutaryl-coenzyme A reductase
L3_072_000G1_scaffold_805_16
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17812..18771
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Lactobacillus reuteri RepID=C0YXN3_LACRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI09695.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_17
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18777..19475
DNA (699bp) protein (233aa)
Silent information regulator protein Sir2 n=4 Tax=Lactobacillus reuteri RepID=A5VI04_LACRD
NAD-dependent deacetylase
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EEI09696.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_18
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19530..19655)
DNA (126bp) protein (42aa)
Uncharacterized protein n=3 Tax=Lactobacillus reuteri RepID=C0YXN5_LACRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI09697.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_19
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19924..20772
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Lactobacillus reuteri RepID=C0YXN6_LACRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ82479.1}; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
L3_072_000G1_scaffold_805_20
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


20850..22877
DNA (2028bp) protein (676aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
Methionine--tRNA ligase n=4 Tax=Lactobacillus reuteri RepID=A5VI06_LACRD
methionyl-tRNA synthase
L3_072_000G1_scaffold_805_21
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22879..23688
DNA (810bp) protein (270aa)
Hydrolase, TatD family n=1 Tax=Lactobacillus reuteri (strain DSM 20016) RepID=A5VI07_LACRD
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ABQ82481.1}; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
L3_072_000G1_scaffold_805_22
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23685..24251
DNA (567bp) protein (189aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=557436 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain DSM 20016).;"
Ribonuclease M5 n=4 Tax=Lactobacillus reuteri RepID=A5VI08_LACRD
hypothetical protein
L3_072_000G1_scaffold_805_23
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


24244..25137
DNA (894bp) protein (298aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000255|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; TaxID=557433 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain JCM 1112).;"
Ribosomal RNA small subunit methyltransferase A n=4 Tax=Lactobacillus reuteri RepID=RSMA_LACRD
ksgA; dimethyladenosine transferase
L3_072_000G1_scaffold_805_24
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25228..25470
DNA (243bp) protein (81aa)
Uncharacterized protein n=12 Tax=Lactobacillus reuteri RepID=F8DKY2_LACRS
veg protein
VEG protein {ECO:0000313|EMBL:AGR63678.1}; TaxID=1358027 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri TD1.;"
L3_072_000G1_scaffold_805_25
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25656..26507
DNA (852bp) protein (284aa)
ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1358027 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri TD1.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=5 Tax=Lactobacillus reuteri RepID=ISPE_LACRD
L3_072_000G1_scaffold_805_26
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26647..27558
DNA (912bp) protein (304aa)
Periplasmic solute binding protein n=5 Tax=Lactobacillus reuteri RepID=A5VI12_LACRD
zinc/iron ABC transporter substrate binding component
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EEI09705.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_27
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27566..27676
DNA (111bp) protein (37aa)
ABC transporter ATPase n=1 Tax=Lactobacillus reuteri RepID=UPI0003131344
zinc/iron ABC transporter ATP-binding component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEI57606.1}; TaxID=491077 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain ATCC 55730 / SD2112).;"
L3_072_000G1_scaffold_805_28
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27710..28237
DNA (528bp) protein (176aa)
ABC transporter related n=5 Tax=Lactobacillus reuteri RepID=A5VI13_LACRD
ABC transporter ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI09706.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_29
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28237..29034
DNA (798bp) protein (266aa)
ABC-3 protein n=4 Tax=Lactobacillus reuteri RepID=A5VI14_LACRD
zinc/iron ABC transporter permease component
ABC 3 transport family protein {ECO:0000313|EMBL:EEI09707.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L3_072_000G1_scaffold_805_30
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29266..30111
DNA (846bp) protein (282aa)
Purine operon repressor, PurR n=6 Tax=Lactobacillus reuteri RepID=A5VI15_LACRD
purR; purine operon repressor
Pur operon repressor PurR {ECO:0000313|EMBL:EEI09708.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
Displaying items 1-30 of 32 in total

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