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L3_072_000M1_scaffold_8328

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_8328_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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451..1317
DNA (867bp) protein (289aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridium RepID=A7VYT3_9CLOT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDC03417.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Uncharacterized homolog of PSP1
L3_072_000M1_scaffold_8328_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1582..1812)
DNA (231bp) protein (77aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N756_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJF40327.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Helix-turn-helix.
L3_072_000M1_scaffold_8328_3
unknown

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1920..2105
DNA (186bp) protein (62aa)

This feature has no annotations

L3_072_000M1_scaffold_8328_4
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2174..2452)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DP64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79662.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_072_000M1_scaffold_8328_5
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2531..3115)
DNA (585bp) protein (195aa)
RNA polymerase sigma-H factor n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M4F7_9FIRM
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EOS65586.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_072_000M1_scaffold_8328_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3705..4994)
DNA (1290bp) protein (430aa)
pepD; Xaa-His dipeptidase (EC:3.4.13.3)
Dipeptidase D n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD67_9FIRM
Dipeptidase D {ECO:0000313|EMBL:EGJ46763.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_072_000M1_scaffold_8328_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5529..6722
DNA (1194bp) protein (398aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QSS6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK59284.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative sugar ABC transporter ATP-binding protein
L3_072_000M1_scaffold_8328_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6773..8143)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VKH3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ENY86068.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_8328_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8387..8653
DNA (267bp) protein (89aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCB3_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EDS10868.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
spoIIID; stage III sporulation protein D
L3_072_000M1_scaffold_8328_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(8915..9409)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DA19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81844.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
chromate transporter
L3_072_000M1_scaffold_8328_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9406..9948)
DNA (543bp) protein (181aa)
Chromate transport protein ChrA n=1 Tax=Clostridium sp. CAG:58 RepID=R6RS13_9CLOT
Chromate transport protein ChrA {ECO:0000313|EMBL:CDC50465.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
putative chromate transporter
L3_072_000M1_scaffold_8328_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10473..11411)
DNA (939bp) protein (313aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CTD6_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDA76064.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
polysaccharide deacetylase
L3_072_000M1_scaffold_8328_13
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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11736..11954
DNA (219bp) protein (73aa)
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0W0_ISOPI
Tax=RBG_13_Chloroflexi_52_14_curated
L3_072_000M1_scaffold_8328_14
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11914..12729
DNA (816bp) protein (272aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
eno; Enolase (EC:4.2.1.11)
Enolase n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GSQ8_9FIRM
L3_072_000M1_scaffold_8328_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12986..13894)
DNA (909bp) protein (303aa)
Mg2 transporter protein CorA family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SM89_9FIRM
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:CCZ46012.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Mg2 transporter protein CorA family protein
L3_072_000M1_scaffold_8328_16
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13954..14445)
DNA (492bp) protein (164aa)
Phosphinothricin N-acetyltransferase n=1 Tax=Anaerotruncus sp. CAG:390 PF5_9FIRM">RepID=R7EPF5_9FIRM
Phosphinothricin N-acetyltransferase {ECO:0000313|EMBL:CDE04779.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Phosphinothricin acetyltransferase
L3_072_000M1_scaffold_8328_17
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15324..16844
DNA (1521bp) protein (507aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
guaB; Inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQP8_9FIRM
L3_072_000M1_scaffold_8328_18
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(16715..17533)
DNA (819bp) protein (273aa)
Major Facilitator Superfamily n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWI1_9FIRM
Major Facilitator Superfamily {ECO:0000313|EMBL:CCX72270.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Major Facilitator Superfamily.
Displaying 18 items

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