ggKbase home page

L3_072_000M1_scaffold_4639

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4639_1
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1135
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8AB82_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO75335.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_072_000M1_scaffold_4639_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1417..1833
DNA (417bp) protein (139aa)
alkyl sulfatase or beta-lactamase (EC:3.1.6.-)
Metallo-beta-lactamase superfamily protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S107_9PLAN
Predicted metal-dependent RNase%2C consists of a metallo-beta-lactamase domain and an RNA-binding KH domain {ECO:0000313|EMBL:CRH79554.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_072_000M1_scaffold_4639_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1890..2525)
DNA (636bp) protein (212aa)
HD domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JRV6_9BACT
HD domain protein {ECO:0000313|EMBL:CDE65577.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
HD superfamily hydrolase
L3_072_000M1_scaffold_4639_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2538..3512)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8YN60_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64570.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Kappa-carrageenase
L3_072_000M1_scaffold_4639_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3525..4841)
DNA (1317bp) protein (439aa)
cgiA2; iota-carrageenase (EC:3.2.1.157)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8YN41_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64550.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_072_000M1_scaffold_4639_6
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4849..7449)
DNA (2601bp) protein (867aa)
Glycoside hydrolase, family GH74 {ECO:0000313|EMBL:CAZ97765.1}; EC=3.2.1.- {ECO:0000313|EMBL:CAZ97765.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
glycoside hydrolase (EC:3.2.1.-)
Glycoside hydrolase, family GH74 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L1M6_ZOBGA
L3_072_000M1_scaffold_4639_7
unknown

Not on your lists

7507..7794
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_4639_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7908..8165
DNA (258bp) protein (86aa)
DNA binding domain, excisionase family n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QYM9_9BACT
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EXZ75780.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
DNA binding domain, excisionase family
L3_072_000M1_scaffold_4639_9
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8181..9836
DNA (1656bp) protein (552aa)
Type III restriction protein res subunit n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z609_ODOSD
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ADY31588.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Displaying 9 items

View Taxonomy