ggKbase home page

L3_072_000M1_scaffold_3189

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3189_1
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

512..832
DNA (321bp) protein (107aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PE51_9BACT
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EFB35015.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Helix-turn-helix.
L3_072_000M1_scaffold_3189_2
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

835..2088
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6SUV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC64993.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
toxin HipA
L3_072_000M1_scaffold_3189_3
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2580..3059
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NLK6_9BACE
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEF87204.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
GCN5-related N-acetyltransferase
L3_072_000M1_scaffold_3189_4
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3624..4673
DNA (1050bp) protein (350aa)
Type II site-specific deoxyribonuclease (EC:3.1.21.4)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KLA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47006.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L3_072_000M1_scaffold_3189_5
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4670..5986
DNA (1317bp) protein (439aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Cytosine-specific methyltransferase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KU32_9FIRM
DNA-methyltransferase Dcm
L3_072_000M1_scaffold_3189_6
unknown

Not on your lists

6348..7070
DNA (723bp) protein (241aa)

This feature has no annotations

L3_072_000M1_scaffold_3189_7
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7226..8311
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33913.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
transposase
L3_072_000M1_scaffold_3189_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8713..9123
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHE9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33912.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_072_000M1_scaffold_3189_9
unknown

Not on your lists

9384..9545
DNA (162bp) protein (54aa)

This feature has no annotations

L3_072_000M1_scaffold_3189_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9521..9943
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6CP12_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66987.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_072_000M1_scaffold_3189_11
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10108..10638
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHE7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33910.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_072_000M1_scaffold_3189_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10672..11055
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33909.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_072_000M1_scaffold_3189_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11144..13711
DNA (2568bp) protein (856aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHE5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33908.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
VirE protein
L3_072_000M1_scaffold_3189_14
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13776..14336
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHE4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33907.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L3_072_000M1_scaffold_3189_15
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14519..15739
DNA (1221bp) protein (407aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
Alpha-galactosidase n=1 Tax=Prevotella stercorea DSM 18206 RepID=G6AZT7_9BACT
alpha-galactosidase
L3_072_000M1_scaffold_3189_16
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15883..16716)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6BR04_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC26212.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
hypothetical protein
L3_072_000M1_scaffold_3189_17
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16732..17382)
DNA (651bp) protein (217aa)
NifU-related domain containing protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PRQ4_9BACT
NifU-related domain containing protein {ECO:0000313|EMBL:CDC26210.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
hypothetical protein
L3_072_000M1_scaffold_3189_18
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17613..18122
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PZL5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC26209.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
hypothetical protein
L3_072_000M1_scaffold_3189_19
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18164..18643
DNA (480bp) protein (160aa)
SsrA-binding protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PP95_9BACT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
smpB; SsrA-binding protein
L3_072_000M1_scaffold_3189_20
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18713..21499
DNA (2787bp) protein (929aa)
Methionine synthase n=1 Tax=Prevotella sp. CAG:386 RepID=R6Q5Z5_9BACT
Methionine synthase {ECO:0000313|EMBL:CDC26206.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
L3_072_000M1_scaffold_3189_21
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21547..22179
DNA (633bp) protein (211aa)
Putative haloacid dehalogenase-type hydrolase n=1 Tax=Prevotella sp. CAG:386 RepID=R6PZL0_9BACT
Putative haloacid dehalogenase-type hydrolase {ECO:0000313|EMBL:CDC26204.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
HAD-superfamily hydrolase
L3_072_000M1_scaffold_3189_22
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22287..23150
DNA (864bp) protein (288aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
map_2; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Prevotella sp. CAG:386 RepID=R6QW60_9BACT
L3_072_000M1_scaffold_3189_23
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


23157..24182
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Prevotella sp. CAG:386 RepID=R6Q5Y7_9BACT
putative glycoprotease GCP
L3_072_000M1_scaffold_3189_24
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24208..24720
DNA (513bp) protein (171aa)
Competence/damage-inducible protein CinA n=1 Tax=Prevotella sp. CAG:386 RepID=R6PP85_9BACT
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:CDC26198.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
competence/damage-inducible protein CinA-like protein
L3_072_000M1_scaffold_3189_25
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


24948..25211
DNA (264bp) protein (88aa)
50S ribosomal protein L28 n=1 Tax=Prevotella sp. CAG:386 RepID=R6PL88_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
rpmB; 50S ribosomal protein L28
L3_072_000M1_scaffold_3189_26
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


25217..25351
DNA (135bp) protein (45aa)
50S ribosomal protein L33 n=4 Tax=Prevotella RepID=D1PGK7_9BACT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
rpmG; 50S ribosomal protein L33
L3_072_000M1_scaffold_3189_27
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25399..25557
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PJ29_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC24343.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
PF14128 domain protein
L3_072_000M1_scaffold_3189_28
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25681..26640
DNA (960bp) protein (320aa)
Signal recognition particle receptor FtsY n=1 Tax=Prevotella sp. CAG:386 RepID=R6PL93_9BACT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
ftsY; recognition particle-docking protein FtsY
L3_072_000M1_scaffold_3189_29
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26667..27932
DNA (1266bp) protein (422aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262934 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:732.;"
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.- 2.8.1.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Prevotella sp. CAG:732 RepID=R6YPP2_9BACT
L3_072_000M1_scaffold_3189_30
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28179..28733
DNA (555bp) protein (185aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
phosphodiesterase family protein (EC:3.1.-.-)
Phosphodiesterase YfcE n=1 Tax=Prevotella sp. CAG:386 RepID=R6PUB1_9BACT
Displaying items 1-30 of 40 in total

View Taxonomy