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L3_072_000M1_scaffold_3367

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3367_1
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..549)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MIM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99587.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_3367_2
unknown

Not on your lists

comp(494..637)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_072_000M1_scaffold_3367_3
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(879..1088)
DNA (210bp) protein (70aa)
UPF0154 protein OB1676 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MI63_9CLOT
UPF0154 protein OB1676 {ECO:0000313|EMBL:CDE99422.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
hypothetical protein
L3_072_000M1_scaffold_3367_4
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1142..1561)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MGD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99421.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_3367_5
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1603..3744)
DNA (2142bp) protein (714aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2B n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEA1_9CLOT
Penicillin-binding protein 2B {ECO:0000313|EMBL:CDE99419.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_3367_6
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3754..4044)
DNA (291bp) protein (97aa)
Cell division protein FtsL n=1 Tax=Clostridium sp. CAG:628 RepID=R7MI57_9CLOT
Cell division protein FtsL {ECO:0000313|EMBL:CDE99417.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_3367_7
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4060..4962)
DNA (903bp) protein (301aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFJ6_9CLOT
16S rRNA methyltransferase
L3_072_000M1_scaffold_3367_8
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4962..5393)
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:628 RepID=R7ME97_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
MraZ protein
L3_072_000M1_scaffold_3367_9
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5528..6133)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MI52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99412.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_3367_10
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6126..7004)
DNA (879bp) protein (293aa)
Elongation factor Ts n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFJ2_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
translation elongation factor Ts
L3_072_000M1_scaffold_3367_11
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7017..7925)
DNA (909bp) protein (303aa)
30S ribosomal protein S2 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHH5_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rpsB; 30S ribosomal protein S2
L3_072_000M1_scaffold_3367_12
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(8062..8655)
DNA (594bp) protein (198aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TTK0_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC75485.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Formate/nitrite transporter superfamily protein
L3_072_000M1_scaffold_3367_13
unknown

Not on your lists

comp(8686..8814)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_072_000M1_scaffold_3367_14
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8783..9178)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7ME48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99359.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_3367_15
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9268..10131)
DNA (864bp) protein (288aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:628 RepID=R7MG84_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
GTPase
L3_072_000M1_scaffold_3367_16
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10150..10653)
DNA (504bp) protein (168aa)
HAD-superfamily hydrolase subfamily IA variant 3 n=1 Tax=Clostridium sp. CAG:470 RepID=R7FNE1_9CLOT
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CDE15217.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
L3_072_000M1_scaffold_3367_17
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10643..11686)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M297_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95189.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
Virulence protein
L3_072_000M1_scaffold_3367_18
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11804..11935)
DNA (132bp) protein (44aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVP4_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_072_000M1_scaffold_3367_19
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12004..12849)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H5Q8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB32100.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
hypothetical protein
L3_072_000M1_scaffold_3367_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12917..13087)
DNA (171bp) protein (57aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Alanine racemase n=1 Tax=Clostridium sp. CAG:269 RepID=R7J0C8_9CLOT
L3_072_000M1_scaffold_3367_21
unknown

Not on your lists

comp(13134..13232)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_072_000M1_scaffold_3367_22
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13229..14215)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MCN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98131.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
vanTG; serine/alanine racemase
L3_072_000M1_scaffold_3367_23
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14309..14740)
DNA (432bp) protein (144aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:1219 RepID=R5SP92_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCZ55610.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
hypothetical protein
L3_072_000M1_scaffold_3367_24
Clostridium sp. CAG:921, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14947..15243)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:921 RepID=R5LDQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY71092.1}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;"
hypothetical protein
L3_072_000M1_scaffold_3367_25
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15272..15505)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M297_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95189.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
Virulence protein
L3_072_000M1_scaffold_3367_26
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15565..16320)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:914 RepID=R7M297_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE95189.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
hypothetical protein
L3_072_000M1_scaffold_3367_27
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16544..16663)
DNA (120bp) protein (40aa)
DNA-damage-inducible protein D n=1 Tax=Clostridium sp. CAG:609 RepID=R7P6C0_9CLOT
DNA-damage-inducible protein D {ECO:0000313|EMBL:CDF20606.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
hypothetical protein
L3_072_000M1_scaffold_3367_28
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16681..17151)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE56325.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_072_000M1_scaffold_3367_29
Clostridium sp. CAG:451, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17384..18265
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:451 RepID=R7KCB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE74054.1}; TaxID=1262809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:451.;"
L3_072_000M1_scaffold_3367_30
unknown

Not on your lists

comp(18459..18668)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

View Taxonomy