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L3_072_000M1_scaffold_2221

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2221_1
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(754..1278)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99180.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
conserved hypothetical protein (DUF402)
L3_072_000M1_scaffold_2221_2
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1363..2544)
DNA (1182bp) protein (394aa)
ctpA-like serine protease (EC:3.4.21.-)
Carboxyl-terminal protease n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHG7_9CLOT
Carboxyl-terminal protease {ECO:0000313|EMBL:CDE99182.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
L3_072_000M1_scaffold_2221_3
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2693..3037)
DNA (345bp) protein (115aa)
50S ribosomal protein L17 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDL1_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplQ; 50S ribosomal protein L17
L3_072_000M1_scaffold_2221_4
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3047..3997)
DNA (951bp) protein (317aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFP7_9CLOT
L3_072_000M1_scaffold_2221_5
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4013..4396)
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHH2_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rpsK; 30S ribosomal protein S11
L3_072_000M1_scaffold_2221_6
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4408..4773)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDL6_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rpsM; 30S ribosomal protein S13
L3_072_000M1_scaffold_2221_7
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4786..4899)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFQ3_9CLOT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
50S ribosomal protein L36
L3_072_000M1_scaffold_2221_8
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4914..5129)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MGX7_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
bacterial translation initiation factor 1 (bIF-1)
L3_072_000M1_scaffold_2221_9
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5122..5880)
DNA (759bp) protein (253aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEX4_9CLOT
L3_072_000M1_scaffold_2221_10
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5873..6532)
DNA (660bp) protein (220aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
Adenylate kinase n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHI6_9CLOT
adenylate kinase
L3_072_000M1_scaffold_2221_11
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6535..7791)
DNA (1257bp) protein (419aa)
Protein translocase subunit SecY n=1 Tax=Clostridium sp. CAG:628 RepID=R7MGY3_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
secY; preprotein translocase subunit SecY
L3_072_000M1_scaffold_2221_12
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7792..8235)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDM7_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplO; 50S ribosomal protein L15
L3_072_000M1_scaffold_2221_13
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8235..8765)
DNA (531bp) protein (177aa)
30S ribosomal protein S5 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEY2_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
30S ribosomal protein S5
L3_072_000M1_scaffold_2221_14
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8782..9135)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFR5_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
50S ribosomal protein L18
L3_072_000M1_scaffold_2221_15
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9146..9682)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHJ2_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplF; 50S ribosomal protein L6
L3_072_000M1_scaffold_2221_16
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9692..10087)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MGY9_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rpsH; 30S ribosomal protein S8
L3_072_000M1_scaffold_2221_17
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10106..10291)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDN2_9CLOT
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rpsN; 30S ribosomal protein S14
L3_072_000M1_scaffold_2221_18
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10304..10843)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEY8_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplE; 50S ribosomal protein L5
L3_072_000M1_scaffold_2221_19
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10853..11113)
DNA (261bp) protein (87aa)
50S ribosomal protein L24 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFS2_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
50S ribosomal protein L24
L3_072_000M1_scaffold_2221_20
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11126..11494)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHK1_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
50S ribosomal protein L14
L3_072_000M1_scaffold_2221_21
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11513..11770)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MGZ5_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
SSU ribosomal protein S17p (S11e)
L3_072_000M1_scaffold_2221_22
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11779..11973)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDN8_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
RpmC; 50S ribosomal protein L29
L3_072_000M1_scaffold_2221_23
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11963..12397)
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MEZ4_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplP; 50S ribosomal protein L16
L3_072_000M1_scaffold_2221_24
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12375..13052)
DNA (678bp) protein (226aa)
30S ribosomal protein S3 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFS8_9CLOT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rpsC; 30S ribosomal protein S3
L3_072_000M1_scaffold_2221_25
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13056..13397)
DNA (342bp) protein (114aa)
50S ribosomal protein L22 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHK7_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplV; 50S ribosomal protein L22
L3_072_000M1_scaffold_2221_26
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13409..13675)
DNA (267bp) protein (89aa)
30S ribosomal protein S19 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MH02_9CLOT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
30S ribosomal protein S19
L3_072_000M1_scaffold_2221_27
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13693..14526)
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDP5_9CLOT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplB; 50S ribosomal protein L2
L3_072_000M1_scaffold_2221_28
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14539..14808)
DNA (270bp) protein (90aa)
50S ribosomal protein L23 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MF01_9CLOT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplW; 50S ribosomal protein L23
L3_072_000M1_scaffold_2221_29
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14808..15431)
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MFT3_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
rplD; 50S ribosomal protein L4
L3_072_000M1_scaffold_2221_30
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15431..16210)
DNA (780bp) protein (260aa)
50S ribosomal protein L3 n=1 Tax=Clostridium sp. CAG:628 RepID=R7MHL6_9CLOT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
50S ribosomal protein L3
Displaying items 1-30 of 38 in total

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