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L3_072_000M1_scaffold_1101

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1101_1
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

237..593
DNA (357bp) protein (119aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:413 RepID=R6NCE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIC04172.1}; TaxID=1402208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis DPC 6832.;"
L3_072_000M1_scaffold_1101_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

624..803
DNA (180bp) protein (60aa)
Adenylate kinase and related kinases n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K1F9_9FIRM
Adenylate kinase and related kinases
Adenylate kinase and related kinases {ECO:0000313|EMBL:CDE37432.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_072_000M1_scaffold_1101_3
unknown

Not on your lists

826..954
DNA (129bp) protein (43aa)

This feature has no annotations

L3_072_000M1_scaffold_1101_4
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1049..2263
DNA (1215bp) protein (405aa)
Putative transposase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z248_EUBE2
putative transposase
Putative transposase {ECO:0000313|EMBL:ACR71238.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_072_000M1_scaffold_1101_5
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2292..2747)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74765.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
family A DNA-dependent DNA polymerase
L3_072_000M1_scaffold_1101_6
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2790..3440)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74976.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
DNA-directed DNA polymerase
L3_072_000M1_scaffold_1101_7
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3594..3815)
DNA (222bp) protein (74aa)
DNA polymerase I (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74976.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_072_000M1_scaffold_1101_8
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3872..4069)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LS33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86429.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_072_000M1_scaffold_1101_9
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4066..4251)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74975.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_072_000M1_scaffold_1101_10
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4326..4889)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74974.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_072_000M1_scaffold_1101_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5063..5260)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD14693.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_072_000M1_scaffold_1101_12
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5264..5620)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ89258.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L3_072_000M1_scaffold_1101_13
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5818..6261
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74969.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_072_000M1_scaffold_1101_14
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6264..6941
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74968.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
phage/plasmid primase, P4 family
L3_072_000M1_scaffold_1101_15
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6948..7706
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74968.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
phage/plasmid primase, P4 family
L3_072_000M1_scaffold_1101_16
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7722..8099
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74968.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative phage-related protein
L3_072_000M1_scaffold_1101_17
unknown

Not on your lists

8304..9554
DNA (1251bp) protein (417aa)

This feature has no annotations

L3_072_000M1_scaffold_1101_18
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9599..9928
DNA (330bp) protein (110aa)
KAP family P-loop domain protein n=1 Tax=Leptospira interrogans str. HAI1536 RepID=M6VJE3_LEPIR
KAP family P-loop domain protein {ECO:0000313|EMBL:EMO55151.1}; TaxID=1193041 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. HAI1536.;"
kap p-loop
L3_072_000M1_scaffold_1101_19
unknown

Not on your lists

9955..10098
DNA (144bp) protein (48aa)

This feature has no annotations

L3_072_000M1_scaffold_1101_20
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10076..10483
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EZU6_STEMA
KAP P-loop domain-containing protein
Tax=GWC2_Geobacteraceae_55_20_curated
L3_072_000M1_scaffold_1101_21
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10473..10910
DNA (438bp) protein (146aa)
Tatd deoxyribonuclease family n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TD46_HELMI
tatd deoxyribonuclease family
Tatd deoxyribonuclease family {ECO:0000313|EMBL:ABZ82744.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
L3_072_000M1_scaffold_1101_22
unknown

Not on your lists

10992..11204
DNA (213bp) protein (71aa)

This feature has no annotations

L3_072_000M1_scaffold_1101_23
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11383..11997
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IR83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS21492.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_072_000M1_scaffold_1101_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12248..13693)
DNA (1446bp) protein (482aa)
Transposase IS66 n=2 Tax=unclassified Lachnospiraceae RepID=E5XHQ6_9FIRM
Transposase IS66 {ECO:0000313|EMBL:EFV19149.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Transposase and inactivated derivatives
L3_072_000M1_scaffold_1101_25
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13968..14126)
DNA (159bp) protein (53aa)
Transposase and inactivated derivatives n=1 Tax=Eubacterium sp. CAG:248 RepID=R6KA46_9FIRM
Transposase and inactivated derivatives {ECO:0000313|EMBL:CDB66921.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
Transposase and inactivated derivatives
L3_072_000M1_scaffold_1101_26
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14235..14330)
DNA (96bp) protein (32aa)
Transposase and inactivated derivatives n=1 Tax=Eubacterium sp. CAG:248 RepID=R6KA46_9FIRM
Transposase and inactivated derivatives {ECO:0000313|EMBL:CDB66921.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
Transposase and inactivated derivatives
L3_072_000M1_scaffold_1101_27
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14323..14718)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K0E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB66920.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
hypothetical protein
L3_072_000M1_scaffold_1101_28
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14846..15550
DNA (705bp) protein (235aa)
Type I site-specific deoxyribonuclease n=1 Tax=Clostridium sp. CAG:122 RepID=R5S822_9CLOT
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:CCZ41247.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
type III restriction protein res subunit
L3_072_000M1_scaffold_1101_29
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15629..15865
DNA (237bp) protein (79aa)
Type I restriction-modification system, restriction subunit R (EC:3.1.21.3)
Type I site-specific deoxyribonuclease n=1 Tax=Clostridium sp. CAG:122 RepID=R5S822_9CLOT
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:CCZ41247.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_072_000M1_scaffold_1101_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16042..17187
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K656_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70517.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Phage protein
Displaying items 1-30 of 43 in total

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