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L3_072_000M1_scaffold_1214

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1214_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..230)
DNA (228bp) protein (76aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D61E97
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CBK63363.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(252..1043)
DNA (792bp) protein (264aa)
S1/P1 Nuclease n=1 Tax=Alistipes senegalensis RepID=UPI0003127D0E
S1/P1 Nuclease.
S1/P1 Nuclease {ECO:0000313|EMBL:CBK65148.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1040..1960)
DNA (921bp) protein (307aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Alistipes senegalensis RepID=UPI000308CB3E
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCZ96514.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_1214_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1964..3736)
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FE5BDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78303.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_1214_5
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3706..5640)
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0003761636
Uncharacterized protein {ECO:0000313|EMBL:CDD17853.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
hypothetical protein
L3_072_000M1_scaffold_1214_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5659..8115)
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00038224CC
Uncharacterized protein {ECO:0000313|EMBL:CCZ76621.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_072_000M1_scaffold_1214_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8135..11437)
DNA (3303bp) protein (1101aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00037AF8C6
Uncharacterized protein {ECO:0000313|EMBL:EFR58839.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_072_000M1_scaffold_1214_8
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11482..13236)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D95576
Uncharacterized protein {ECO:0000313|EMBL:EGN03345.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
SusD family.
L3_072_000M1_scaffold_1214_9
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13256..16825)
DNA (3570bp) protein (1190aa)
TonB-linked outer membrane protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289A4C8
Outer membrane receptor proteins, mostly Fe transport
Uncharacterized protein {ECO:0000313|EMBL:EGN03346.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_072_000M1_scaffold_1214_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16986..17978)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000379C7E1
Fe2+-dicitrate sensor membrane protein
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFR58877.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_072_000M1_scaffold_1214_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18105..18662)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00036B1F53
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CCZ75248.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RNA polymerase sigma-70 factor
L3_072_000M1_scaffold_1214_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18839..19948)
DNA (1110bp) protein (370aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI0002E1B53D
Protein of unknown function (DUF2776).
Uncharacterized protein {ECO:0000313|EMBL:CBK63079.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20075..20662
DNA (588bp) protein (196aa)
haloacid dehalogenase n=1 Tax=Alistipes senegalensis RepID=UPI0003704997
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCZ96410.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_1214_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20730..24005)
DNA (3276bp) protein (1092aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0003709895
Uncharacterized protein {ECO:0000313|EMBL:CBK63077.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
L3_072_000M1_scaffold_1214_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24281..25429
DNA (1149bp) protein (383aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F6FB2F
Predicted permease
Predicted permease {ECO:0000313|EMBL:CBK63076.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25562..27418
DNA (1857bp) protein (619aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
carboxylase n=1 Tax=Alistipes senegalensis RepID=UPI0003738356
Pyruvate/oxaloacetate carboxyltransferase {ECO:0000313|EMBL:CCZ96414.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_1214_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27502..28110)
DNA (609bp) protein (203aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
peptide deformylase n=1 Tax=Alistipes senegalensis RepID=UPI0002FDC178
peptide deformylase
L3_072_000M1_scaffold_1214_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28329..28940
DNA (612bp) protein (204aa)
Ion channel n=1 Tax=Alistipes senegalensis RepID=UPI00030C510D
Ion channel.
Ion channel {ECO:0000313|EMBL:CBK63072.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_19
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28956..30332)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00030A4540
Arylsulphatase A {ECO:0000313|EMBL:CCX94690.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
sulfatase
L3_072_000M1_scaffold_1214_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30504..30989)
DNA (486bp) protein (162aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Alistipes senegalensis RepID=UPI0002DB400C
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_21
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31158..32609
DNA (1452bp) protein (484aa)
sodium/iodide co-transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002F3B909
Na+/proline symporter {ECO:0000313|EMBL:CCZ96406.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Na+/proline symporter
L3_072_000M1_scaffold_1214_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32599..35592
DNA (2994bp) protein (998aa)
fibronectin n=1 Tax=Alistipes sp. JC136 RepID=UPI0002898419
Fibronectin type III domain {ECO:0000313|EMBL:CCZ96405.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_072_000M1_scaffold_1214_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35623..36072
DNA (450bp) protein (150aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Alistipes senegalensis RepID=UPI0002E2A327
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK63085.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_24
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36074..36982
DNA (909bp) protein (303aa)
transporter n=1 Tax=Alistipes senegalensis RepID=UPI000312B951
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ96402.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_1214_25
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36979..38172
DNA (1194bp) protein (398aa)
major facilitator transporter n=1 Tax=Alistipes senegalensis RepID=UPI0003093BFA
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:CBK63087.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38162..38824
DNA (663bp) protein (221aa)
acetyltransferase n=1 Tax=Alistipes sp. JC136 RepID=UPI00028A137F
Uncharacterized protein {ECO:0000313|EMBL:CCZ96400.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
acetyltransferase
L3_072_000M1_scaffold_1214_27
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38783..39148)
DNA (366bp) protein (122aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FE4E55
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCZ96399.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_1214_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39155..39814)
DNA (660bp) protein (220aa)
haloacid dehalogenase n=1 Tax=Alistipes senegalensis RepID=UPI00036C0FAF
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CBK63090.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_1214_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39877..42348)
DNA (2472bp) protein (824aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F2586D
Uncharacterized protein {ECO:0000313|EMBL:CBK63091.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
L3_072_000M1_scaffold_1214_30
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42452..42931
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
cysteinyl-tRNA(Pro) deacylase n=1 Tax=Alistipes senegalensis RepID=UPI0002F53B51
ybaK/ebsC protein
Displaying items 1-30 of 40 in total

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