ggKbase home page

L3_072_000M1_scaffold_1240

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1240_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

421..1980
DNA (1560bp) protein (520aa)
Glycosyl hydrolase family 20 catalytic domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9F8_9BACE
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CCZ72264.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
beta-hexosaminidase
L3_072_000M1_scaffold_1240_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1971..2117
DNA (147bp) protein (49aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZL45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72265.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000M1_scaffold_1240_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2265..4100)
DNA (1836bp) protein (612aa)
von Willebrand factor type A domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZL44_9BACE
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDM19321.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
L3_072_000M1_scaffold_1240_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4257..4826
DNA (570bp) protein (190aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Bacteroides RepID=R5UU64_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ72267.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase sigma factor, sigma-70 family
L3_072_000M1_scaffold_1240_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4823..6040
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q1G5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22683.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_1240_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6067..6939)
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase n=3 Tax=Bacteroides RepID=A5ZL41_9BACE
L3_072_000M1_scaffold_1240_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7385..7966)
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZL40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72270.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1240_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7963..9348)
DNA (1386bp) protein (462aa)
Iron-sulfur cluster-binding protein n=2 Tax=Bacteroides caccae RepID=I8V8C0_9BACE
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDM19316.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
electron transport protein
L3_072_000M1_scaffold_1240_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9345..10085)
DNA (741bp) protein (247aa)
Cysteine-rich domain protein n=4 Tax=root RepID=A5ZL38_9BACE
Cysteine-rich domain protein {ECO:0000313|EMBL:EDM19315.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe-S oxidoreductase
L3_072_000M1_scaffold_1240_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10137..10682)
DNA (546bp) protein (182aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
7-carboxy-7-deazaguanine synthase n=2 Tax=Bacteroides RepID=I9Q1G1_9BACE
Organic radical activating enzymes
L3_072_000M1_scaffold_1240_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10713..11102)
DNA (390bp) protein (130aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=3 Tax=Bacteroides RepID=A5ZL36_9BACE
L3_072_000M1_scaffold_1240_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11231..11590
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0S0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22676.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_1240_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11560..12126)
DNA (567bp) protein (189aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZL34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19311.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
MTA/SAH nucleosidase
L3_072_000M1_scaffold_1240_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12171..12272)
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EQR1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72276.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000M1_scaffold_1240_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12430..12744
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=root RepID=I9Q1F6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72277.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1240_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12757..13047
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZL32_9BACE
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Cell division protein ZapA.
L3_072_000M1_scaffold_1240_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13167..14702
DNA (1536bp) protein (512aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Ribonuclease Y n=3 Tax=Bacteroides RepID=A5ZL31_9BACE
conserved hypothetical protein YmdA/YtgF
L3_072_000M1_scaffold_1240_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14822..15574
DNA (753bp) protein (251aa)
Copper homeostasis protein CutC n=3 Tax=Bacteroides RepID=A5ZL30_9BACE
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Cu2+ homeostasis protein CutC
L3_072_000M1_scaffold_1240_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15558..16772)
DNA (1215bp) protein (405aa)
Sodium ion-translocating decarboxylase, beta subunit n=3 Tax=Bacteroides RepID=A5ZL29_9BACE
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CCZ72281.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
decarboxylase
L3_072_000M1_scaffold_1240_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16787..17218)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZL28_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72282.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1240_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17344..17793)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBI9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22667.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_1240_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17834..20533)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9I0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72284.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1240_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20944..22122
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UMA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72286.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
aminopeptidase C
L3_072_000M1_scaffold_1240_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22233..22934)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9Q1E6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72287.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1240_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22978..24912)
DNA (1935bp) protein (645aa)
Heparinase II/III-like protein n=2 Tax=root RepID=A5ZL22_9BACE
Heparinase II/III-like protein {ECO:0000313|EMBL:EDM19299.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Heparinase II/III-like protein.
L3_072_000M1_scaffold_1240_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25160..26251)
DNA (1092bp) protein (364aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9I7_9BACE
L3_072_000M1_scaffold_1240_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26461..27837
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2N4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72290.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1240_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27876..29030)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EQP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72291.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
acyltransferase
L3_072_000M1_scaffold_1240_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29143..29706)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9Q1E2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22658.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_1240_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29758..31101)
DNA (1344bp) protein (448aa)
Alpha-L-fucosidase n=2 Tax=Bacteroides RepID=A5ZL17_9BACE
Alpha-L-fucosidase {ECO:0000313|EMBL:CCZ72293.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy