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L3_072_000M1_scaffold_1319

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1319_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..2465)
DNA (2463bp) protein (821aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides caccae RepID=A5ZID7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16880.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
response regulator receiver domain-containing protein
L3_072_000M1_scaffold_1319_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2683..4443
DNA (1761bp) protein (587aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZID8_9BACE
hypothetical protein
L3_072_000M1_scaffold_1319_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4455..5720
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UV71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16882.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
acyl-CoA thioesterase
L3_072_000M1_scaffold_1319_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5833..7962)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKT5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16883.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transporter, CPA2 family (2.A.37)
L3_072_000M1_scaffold_1319_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8517..9152)
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9EAI8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16884.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Bacterial DNA-binding protein.
L3_072_000M1_scaffold_1319_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9500..9670
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZIE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16885.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted P-loop ATPase and inactivated derivatives
L3_072_000M1_scaffold_1319_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9958..10176)
DNA (219bp) protein (73aa)
Conserved domain protein n=3 Tax=Bacteroides RepID=A5ZIE5_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM20500.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_1319_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10205..10345)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UV74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16887.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_1319_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10499..14422)
DNA (3924bp) protein (1308aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZIE6_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM20501.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative two-component system sensor histidine kinase/response regulator fusion protein
L3_072_000M1_scaffold_1319_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14742..17987
DNA (3246bp) protein (1082aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=root RepID=A5ZIE7_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM20502.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative outer membrane protein
L3_072_000M1_scaffold_1319_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18029..19606
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8URS8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74162.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative outer membrane protein
L3_072_000M1_scaffold_1319_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19727..20551
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PKD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74161.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative endo-beta-galactosidase
L3_072_000M1_scaffold_1319_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20753..21595
DNA (843bp) protein (281aa)
putative beta-glucanase (EC:3.2.1.73)
Glycosyl hydrolase family 16 n=2 Tax=Bacteroides caccae RepID=A5ZIF0_9BACE
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:EDM20505.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000M1_scaffold_1319_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22127..23269
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UEQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74159.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative outer membrane protein
L3_072_000M1_scaffold_1319_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23622..24419
DNA (798bp) protein (266aa)
Transcriptional regulator AraC family n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7R4_9BACE
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ74158.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative transcription regulator
L3_072_000M1_scaffold_1319_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24786..25919)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ64_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73936.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
permease
L3_072_000M1_scaffold_1319_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25936..26535)
DNA (600bp) protein (200aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Thymidine kinase n=2 Tax=Bacteroides caccae RepID=A5ZJ65_9BACE
thymidine kinase
L3_072_000M1_scaffold_1319_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26701..29916
DNA (3216bp) protein (1072aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ66_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM19696.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-dependent receptor plug
L3_072_000M1_scaffold_1319_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29932..31452
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19697.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_1319_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31465..33303
DNA (1839bp) protein (613aa)
Alkaline phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZJ68_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16899.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alkaline phosphatase
L3_072_000M1_scaffold_1319_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33490..34095
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73941.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1319_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34106..34780
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Bacteroides RepID=A5ZJ70_9BACE
conserved hypothetical protein TIGR00096
L3_072_000M1_scaffold_1319_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34858..35574
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16902.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_1319_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35673..36365
DNA (693bp) protein (231aa)
HAD hydrolase, TIGR02254 family n=2 Tax=Bacteroides caccae RepID=A5ZJ72_9BACE
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:EIY16903.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
HAD superfamily (subfamily IA) hydrolase, TIGR02254
L3_072_000M1_scaffold_1319_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36428..37087
DNA (660bp) protein (220aa)
MarC family membrane protein n=3 Tax=Bacteroides RepID=I9EAK6_9BACE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
conserved hypothetical protein TIGR00427
L3_072_000M1_scaffold_1319_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37158..38717)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZJ74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73946.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000M1_scaffold_1319_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38734..41922)
DNA (3189bp) protein (1063aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9PKE3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16906.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000M1_scaffold_1319_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42172..42270)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UV92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16907.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000M1_scaffold_1319_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42372..43565
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ76_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM19706.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Site-specific recombinase XerD
L3_072_000M1_scaffold_1319_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44191..47199
DNA (3009bp) protein (1003aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAK9_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16909.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent receptor plug
Displaying items 1-30 of 38 in total

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