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L3_072_000M1_scaffold_1653

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1653_1
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..2151)
DNA (2151bp) protein (717aa)
putative type I restriction enzymeP M protein (EC:2.1.1.72)
Type I restriction-modification system, M subunit id=1769707 bin=GWE2_Spirochaete_31_10 species=[Clostridium] innocuum genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Tax=BJP_IG2102_Clostridiales_34_350
L3_072_000M1_scaffold_1653_2
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(2238..2450)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2QRW5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERK65680.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
Predicted transcriptional regulator
L3_072_000M1_scaffold_1653_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2627..3799
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WKR0_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY88122.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
type I restriction-modification system subunit S
L3_072_000M1_scaffold_1653_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4201..4680
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89428.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_1653_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4756..5028
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LX20_9FIRM
DNA-binding protein HU-beta {ECO:0000313|EMBL:EOS62871.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
histone family protein DNA-binding protein
L3_072_000M1_scaffold_1653_6
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5252..5479
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SJY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC61493.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_072_000M1_scaffold_1653_7
unknown

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5485..5721
DNA (237bp) protein (79aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5711..6994
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47735.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative site-specific recombinase
L3_072_000M1_scaffold_1653_9
unknown

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comp(6942..7199)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7257..7475)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QSK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59204.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_072_000M1_scaffold_1653_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(7492..8412)
DNA (921bp) protein (307aa)
Exonuclease n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1Q5_9FIRM
Exonuclease {ECO:0000313|EMBL:CCX72684.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
exonuclease RNase T and DNA polymerase III
L3_072_000M1_scaffold_1653_12
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9011..9772)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT54_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97706.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_072_000M1_scaffold_1653_13
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9747..10991)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT55_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97707.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_072_000M1_scaffold_1653_14
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11897..13354
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KTY5_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00390.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_072_000M1_scaffold_1653_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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13475..14677
DNA (1203bp) protein (401aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
RNA-splicing ligase RtcB n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P237_9FIRM
protein RtcB homolog
L3_072_000M1_scaffold_1653_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14700..15455
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50110.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Predicted nucleotidyltransferase
L3_072_000M1_scaffold_1653_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15460..16794
DNA (1335bp) protein (445aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
HDIG domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P236_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EDM97706.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_072_000M1_scaffold_1653_18
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17049..18740
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJQ7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41062.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_072_000M1_scaffold_1653_19
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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18755..20143
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB31069.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
proteinase inhibitor I4 serpin
L3_072_000M1_scaffold_1653_20
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(20224..20637)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TX49_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48507.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
L3_072_000M1_scaffold_1653_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20876..21127
DNA (252bp) protein (84aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB93_9FIRM
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EHO33914.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_072_000M1_scaffold_1653_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21124..21501
DNA (378bp) protein (126aa)
Death-on-curing family protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB92_9FIRM
Death-on-curing family protein {ECO:0000313|EMBL:EHO33913.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
death-on-curing family protein
L3_072_000M1_scaffold_1653_23
unknown

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22054..22341
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_24
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22319..22555)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JHQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33735.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Predicted transcriptional regulators
L3_072_000M1_scaffold_1653_25
unknown

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comp(22680..22814)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_26
unknown

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comp(22933..23331)
DNA (399bp) protein (133aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_27
unknown

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comp(23328..23675)
DNA (348bp) protein (116aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_28
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23681..24286)
DNA (606bp) protein (202aa)
Ser/Thr phosphatase family protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZK19_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDA39993.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Predicted phosphoesterase or phosphohydrolase
L3_072_000M1_scaffold_1653_29
unknown

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comp(24300..24908)
DNA (609bp) protein (203aa)

This feature has no annotations

L3_072_000M1_scaffold_1653_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(24920..25513)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YG69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27541.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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