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L3_072_000M1_scaffold_1958

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1958_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..478
DNA (477bp) protein (159aa)
RNA polymerase sigma factor n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S655_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
putative RNA polymerase sigma factor
L3_072_000M1_scaffold_1958_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(483..1097)
DNA (615bp) protein (205aa)
Small primase-like proteins (Toprim domain) (EC:3.1.26.8)
Small primase-like proteins (Toprim domain) n=2 Tax=Faecalibacterium prausnitzii RepID=D4K892_9FIRM
Putative ribonuclease M5 {ECO:0000313|EMBL:EDP23089.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_072_000M1_scaffold_1958_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1094..2122)
DNA (1029bp) protein (343aa)
DNA polymerase III, delta subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K891_9FIRM
DNA polymerase III, delta subunit
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBL01054.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2191..4230)
DNA (2040bp) protein (680aa)
ComEC/Rec2-related protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K890_9FIRM
ComEC/Rec2-related protein {ECO:0000313|EMBL:CBL01053.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
ComEC/Rec2-related protein
L3_072_000M1_scaffold_1958_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4321..4860)
DNA (540bp) protein (180aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins n=2 Tax=Faecalibacterium prausnitzii RepID=D4K889_9FIRM
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EDP23086.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_072_000M1_scaffold_1958_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4888..5220)
DNA (333bp) protein (111aa)
Histidine triad domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S650_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:EDP23085.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L3_072_000M1_scaffold_1958_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5300..7960)
DNA (2661bp) protein (887aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Alanine--tRNA ligase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K887_9FIRM
L3_072_000M1_scaffold_1958_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8386..8949)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S648_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01049.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9216..10046
DNA (831bp) protein (277aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EDP23082.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDP23082.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S647_9FIRM
L3_072_000M1_scaffold_1958_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10101..11120)
DNA (1020bp) protein (340aa)
Dehydrogenase, FMN-dependent n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S646_9FIRM
Dehydrogenase, FMN-dependent {ECO:0000313|EMBL:EDP23081.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L3_072_000M1_scaffold_1958_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11596..12486
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K884_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01047.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12555..13367)
DNA (813bp) protein (271aa)
Ricin-type beta-trefoil lectin domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7B0_9FIRM
Ricin-type beta-trefoil lectin domain protein {ECO:0000313|EMBL:EDP22653.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Ricin-type beta-trefoil lectin domain.
L3_072_000M1_scaffold_1958_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13648..15036
DNA (1389bp) protein (463aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7B3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDP22654.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_1958_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15159..16787
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22656.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_072_000M1_scaffold_1958_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16805..17809
DNA (1005bp) protein (335aa)
ABC-type phosphate transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K880_9FIRM
ABC-type phosphate transport system, periplasmic component
ABC-type phosphate transport system, periplasmic component {ECO:0000313|EMBL:CBL01043.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17897..18427
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22658.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_072_000M1_scaffold_1958_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18472..20607
DNA (2136bp) protein (712aa)
Putative peptidoglycan binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7W1_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EDP22566.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Putative peptidoglycan-binding domain-containing protein
L3_072_000M1_scaffold_1958_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20611..21303
DNA (693bp) protein (231aa)
Putative peptidoglycan binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7W3_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EDP22567.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Putative peptidoglycan-binding domain-containing protein
L3_072_000M1_scaffold_1958_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21372..21863)
DNA (492bp) protein (164aa)
Flavodoxin family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7W4_9FIRM
Flavodoxin family protein {ECO:0000313|EMBL:EDP22568.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_072_000M1_scaffold_1958_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21988..22950)
DNA (963bp) protein (321aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.29)
Lactate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBL02233.1}; EC=1.1.1.29 {ECO:0000313|EMBL:CBL02233.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Lactate dehydrogenase and related dehydrogenases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBM0_9FIRM
L3_072_000M1_scaffold_1958_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22979..23341)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBL9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02232.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23338..23610)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBL9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02232.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23701..24423)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
NAD-dependent protein deacetylase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBL8_9FIRM
L3_072_000M1_scaffold_1958_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24511..24981
DNA (471bp) protein (157aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7X0_9FIRM
methylated-DNA--protein-cysteine methyltransferase
L3_072_000M1_scaffold_1958_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25136..25783)
DNA (648bp) protein (216aa)
Response regulator containing CheY-like receiver and SARP domains n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBL7_9FIRM
Response regulator containing CheY-like receiver and SARP domains
Response regulator containing CheY-like receiver and SARP domains {ECO:0000313|EMBL:CBL02230.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26161..26361)
DNA (201bp) protein (67aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBL5_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL02228.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_072_000M1_scaffold_1958_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26361..27407)
DNA (1047bp) protein (349aa)
Membrane protease subunits, stomatin/prohibitin homologs n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBL4_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EDP22577.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_072_000M1_scaffold_1958_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27582..27989)
DNA (408bp) protein (136aa)
ATP synthase, F1 epsilon subunit (delta in mitochondria) (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S897_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_072_000M1_scaffold_1958_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27989..29401)
DNA (1413bp) protein (471aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S898_9FIRM
L3_072_000M1_scaffold_1958_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29483..30361)
DNA (879bp) protein (293aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Faecalibacterium prausnitzii RepID=D4K5A4_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 1-30 of 46 in total

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