ggKbase home page

L3_072_000M1_scaffold_1965

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1965_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..91)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9RFG2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18021.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_072_000M1_scaffold_1965_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(201..1010)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UQN8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV68558.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_072_000M1_scaffold_1965_3
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1007..2020)
DNA (1014bp) protein (338aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3Q041_9BACE
oxidoreductase
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEO61133.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_072_000M1_scaffold_1965_4
unknown

Not on your lists

comp(2041..2676)
DNA (636bp) protein (212aa)

This feature has no annotations

L3_072_000M1_scaffold_1965_5
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2673..3269)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0ND07_RHISP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF18769.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
L3_072_000M1_scaffold_1965_6
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3319..4017)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CDJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS32817.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
family 2 glycosyl transferase
L3_072_000M1_scaffold_1965_7
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4014..4823)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CDJ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS32815.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
glycosyltransferase-like protein
L3_072_000M1_scaffold_1965_8
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4820..5764)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RV55_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY46623.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
acetyltransferase, fucose-4-O-acetylase
L3_072_000M1_scaffold_1965_9
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5795..7027)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SSX6_BACT6
Strain B4064 NODE_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIO66312.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
hypothetical protein
L3_072_000M1_scaffold_1965_10
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7024..7764)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CDJ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS32814.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
putative LPS biosynthesis related glycosyltransferase
L3_072_000M1_scaffold_1965_11
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7754..8401)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I623_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS08830.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_072_000M1_scaffold_1965_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8485..8655)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9R6I3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KER46799.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
L3_072_000M1_scaffold_1965_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8826..9251)
DNA (426bp) protein (142aa)
putative acetyltransferase (EC:2.3.1.-)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF4_9BACE
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDM22523.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000M1_scaffold_1965_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9251..10453)
DNA (1203bp) protein (401aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDM22524.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDM22524.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF5_9BACE
Glycosyltransferase
L3_072_000M1_scaffold_1965_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10461..11480)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22525.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000M1_scaffold_1965_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11488..12477)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22526.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_1965_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12500..13348)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22527.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_1965_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13335..13577)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22527.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000M1_scaffold_1965_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13579..14244)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDF9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22528.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000M1_scaffold_1965_20
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14342..15232)
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Klebsiella pneumoniae RepID=V2ZRE9_KLEPN
Klebsiella pneumoniae genome assembly NOVST {ECO:0000313|EMBL:CEN64755.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
hypothetical protein
L3_072_000M1_scaffold_1965_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15232..16755)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDG0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22529.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
polysaccharide biosynthesis protein
L3_072_000M1_scaffold_1965_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16923..18887)
DNA (1965bp) protein (655aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDG1_9BACE
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EDM22530.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000M1_scaffold_1965_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19161..19925)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L4G6_BACV8
transcriptional regulatory protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40580.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000M1_scaffold_1965_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20544..21746)
DNA (1203bp) protein (401aa)
Integrase n=3 Tax=Bacteroides RepID=A6L4G5_BACV8
integrase
Phage integrase family protein {ECO:0000313|EMBL:KDS45027.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_072_000M1_scaffold_1965_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21830..23683)
DNA (1854bp) protein (618aa)
ATP-binding cassette, subfamily F, uup n=3 Tax=Bacteroides RepID=R9HLL4_BACVU
ATP-binding cassette, subfamily F, uup {ECO:0000313|EMBL:EOS04927.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ATP-binding component of ABC transporter
L3_072_000M1_scaffold_1965_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23703..24536)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L4G3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40577.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000M1_scaffold_1965_27
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24579..24956)
DNA (378bp) protein (126aa)
Lactoylglutathione lyase n=12 Tax=Bacteroides RepID=A6L4G2_BACV8
lactoylglutathione lyase
Glyoxalase family protein {ECO:0000313|EMBL:EEZ22723.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L3_072_000M1_scaffold_1965_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24974..25765)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9UM89_BACVU
metal dependent hydrolase
Putative metal dependent hydrolase {ECO:0000313|EMBL:ABR40575.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_072_000M1_scaffold_1965_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25775..26965)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6L4G0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY83554.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_072_000M1_scaffold_1965_30
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27128..27505)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP, putative n=7 Tax=Bacteroides RepID=A6L4F9_BACV8
endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EET17347.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Displaying items 1-30 of 51 in total

View Taxonomy