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L3_072_000M1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_66_1
MPI_TA06_32_111, Bacteria

Not on your lists

275..589
DNA (315bp) protein (105aa)
UPI0003D1B471 related cluster n=1 Tax=unknown RepID=UPI0003D1B471
TM2 domain-containing protein
Tax=MPI_TA06_32_111
L3_072_000M1_scaffold_66_2
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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706..2391
DNA (1686bp) protein (562aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K7J3_9FIRM
L3_072_000M1_scaffold_66_3
unknown

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comp(2471..2941)
DNA (471bp) protein (157aa)

This feature has no annotations

L3_072_000M1_scaffold_66_4
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3254..5800
DNA (2547bp) protein (849aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
DNA polymerase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G7T8_9PROT
DNA polymerase I
L3_072_000M1_scaffold_66_5
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

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5812..7095
DNA (1284bp) protein (428aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase id=1818618 bin=GWD2_Clostridiales_32_19 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
amidohydrolase
Tax=GWD2_Clostridiales_32_19_curated
L3_072_000M1_scaffold_66_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7363..8319
DNA (957bp) protein (319aa)
Transcriptional regulator CtsR n=1 Tax=Clostridium difficile CD160 RepID=T3DT33_CLODI
Transcriptional regulator CtsR {ECO:0000313|EMBL:EQF29521.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
CtsR family transcriptional regulator
L3_072_000M1_scaffold_66_7
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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8322..10814
DNA (2493bp) protein (831aa)
ATPase with chaperone activity clpC, two ATP-binding domain protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EGZ5_CLOPA
clpC; negative regulator of genetic competence ClpC/MecB
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CDB25852.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
L3_072_000M1_scaffold_66_8
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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10920..11447
DNA (528bp) protein (176aa)
SSU ribosomal protein S30P sigma 54 modulation protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GX49_9FIRM
SSU ribosomal protein S30P sigma 54 modulation protein {ECO:0000313|EMBL:CDB25851.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
hypothetical protein
L3_072_000M1_scaffold_66_9
Bacillus sp. CAG:988, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11660..14281
DNA (2622bp) protein (874aa)
calcium-transporting ATPase 1 (EC:3.6.3.8)
Calcium-translocating P-type ATPase PMCA-type n=1 Tax=Bacillus sp. CAG:988 RepID=R7EZH5_9BACI
Calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CDE07708.1}; TaxID=1262708 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; environmental samples.;" source="Bacillus sp. CAG:988.;"
L3_072_000M1_scaffold_66_10
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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14311..15207
DNA (897bp) protein (299aa)
Mg2 transporter protein CorA family protein id=3191382 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Mg2+ transporter protein, CorA family protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_072_000M1_scaffold_66_11
unknown

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comp(15573..16151)
DNA (579bp) protein (193aa)

This feature has no annotations

L3_072_000M1_scaffold_66_12
unknown

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comp(16166..17386)
DNA (1221bp) protein (407aa)

This feature has no annotations

L3_072_000M1_scaffold_66_13
unknown

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comp(17575..18252)
DNA (678bp) protein (226aa)

This feature has no annotations

L3_072_000M1_scaffold_66_14
unknown

Not on your lists

18378..19340
DNA (963bp) protein (321aa)

This feature has no annotations

L3_072_000M1_scaffold_66_15
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

19629..21209
DNA (1581bp) protein (527aa)
DNA helicase (EC:3.6.4.12)
Replicative DNA helicase n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GJB2_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CDB25538.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
L3_072_000M1_scaffold_66_16
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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21213..22646
DNA (1434bp) protein (478aa)
Glycoside/pentoside/hexuronide:cation symporter, GPH family id=2120145 bin=GWB2_Clostridiales_37_7 species=Glaciecola psychrophila genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
xylose-proton symporter
Tax=GWB2_Clostridiales_37_7_curated
L3_072_000M1_scaffold_66_17
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22805..24646
DNA (1842bp) protein (614aa)
Alanine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FJC5_9FIRM
Alanine--tRNA ligase {ECO:0000313|EMBL:CCY03709.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
alanine--tRNA ligase
L3_072_000M1_scaffold_66_18
unknown

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24765..26315
DNA (1551bp) protein (517aa)

This feature has no annotations

L3_072_000M1_scaffold_66_19
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26376..27794)
DNA (1419bp) protein (473aa)
Phosphoglucomutase n=1 Tax=Clostridium sp. CAG:288 RepID=R7FSB6_9CLOT
Phosphoglucomutase {ECO:0000313|EMBL:CDE16617.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
L3_072_000M1_scaffold_66_20
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27935..28606
DNA (672bp) protein (224aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium sp. AS15 RepID=J5HDW6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJP26283.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
ABC transporter
L3_072_000M1_scaffold_66_21
unknown

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comp(28663..29100)
DNA (438bp) protein (146aa)

This feature has no annotations

L3_072_000M1_scaffold_66_22
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29257..29526
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BC25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA50897.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L3_072_000M1_scaffold_66_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

29519..30658
DNA (1140bp) protein (380aa)
Subtilisin-like serine proteases n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RC68_THETN
AprE; subtilisin-like serine protease
Subtilisin-like serine proteases {ECO:0000313|EMBL:AAM23847.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L3_072_000M1_scaffold_66_24
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30672..31793)
DNA (1122bp) protein (374aa)
Cysteine desulfurase family protein n=3 Tax=Thermoanaerobacter RepID=B0K5M7_THEPX
Cysteine desulfurase {ECO:0000313|EMBL:KJF26371.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
cysteine desulfurase
L3_072_000M1_scaffold_66_25
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31865..32122
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FV55_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE18546.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_66_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

32169..32798
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
Endonuclease III n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R957_THETN
Nth; EndoIII-related endonuclease
L3_072_000M1_scaffold_66_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32859..34121
DNA (1263bp) protein (421aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:349 RepID=R6WE27_9CLOT
cgtA; Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000M1_scaffold_66_28
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34131..34421
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NLT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF14354.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L3_072_000M1_scaffold_66_29
unknown

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comp(34405..35169)
DNA (765bp) protein (255aa)

This feature has no annotations

L3_072_000M1_scaffold_66_30
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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35264..36184
DNA (921bp) protein (307aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KRZ4_ACHPJ
pgpB; Membrane-associated phospholipid phosphatase
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:CCV64576.1}; TaxID=38986 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
Displaying items 1-30 of 101 in total

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