ggKbase home page

L3_072_000M1_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_99_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..2166
DNA (2166bp) protein (722aa)
Eco57I restriction endonuclease n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVR9_9BACT
Eco57I restriction endonuclease {ECO:0000313|EMBL:EDS04122.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
restriction endonuclease
L3_072_000M1_scaffold_99_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2166..2900
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVR8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04121.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Type II restriction endonuclease
L3_072_000M1_scaffold_99_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3178..3720)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVR7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04120.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_99_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3772..4515)
DNA (744bp) protein (248aa)
Caspase domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVR6_9BACT
Caspase domain protein {ECO:0000313|EMBL:EDS04119.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
peptidase C14 caspase catalytic subunit p20
L3_072_000M1_scaffold_99_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5316..6692
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVN4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04118.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transporter
L3_072_000M1_scaffold_99_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6700..7290
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04117.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_072_000M1_scaffold_99_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7292..7780
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04116.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_99_8
unknown

Not on your lists

comp(7777..7869)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_072_000M1_scaffold_99_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8145..9146
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04115.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA-binding protein
L3_072_000M1_scaffold_99_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9524..9925
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MVN0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65212.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_99_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10016..11629
DNA (1614bp) protein (538aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EDS04113.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDS04113.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Pseudouridine synthase n=2 Tax=root RepID=B0MVM9_9BACT
putative ribosomal large subunit pseudouridine synthase
L3_072_000M1_scaffold_99_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11732..13585)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNN4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65231.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_072_000M1_scaffold_99_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14078..15040
DNA (963bp) protein (321aa)
Uncharacterized protein n=4 Tax=root RepID=B0MVM6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04110.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_99_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15091..15696
DNA (606bp) protein (202aa)
Flavin reductase-like protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMU9_9BACT
Flavin reductase-like protein {ECO:0000313|EMBL:CDE65234.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_99_15
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15753..16124)
DNA (372bp) protein (124aa)
Transcriptional regulator, Spx/MgsR family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVM4_9BACT
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EDS04108.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_99_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16450..17730
DNA (1281bp) protein (427aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=4 Tax=root RepID=B0MVM2_9BACT
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDE65236.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
small-conductance mechanosensitive channel
L3_072_000M1_scaffold_99_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17737..19077
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVM1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04105.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_99_18
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19151..19687
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=2 Tax=Alistipes RepID=B0MVM0_9BACT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE65238.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
acetyltransferase (GNAT) family protein
L3_072_000M1_scaffold_99_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19901..21349
DNA (1449bp) protein (483aa)
Transporter major facilitator family protein n=2 Tax=root RepID=R7JMV1_9BACT
Transporter major facilitator family protein {ECO:0000313|EMBL:CDE65239.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
arabinose efflux permease family protein
L3_072_000M1_scaffold_99_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21817..23352)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=root RepID=R7JMU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65240.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
SusD family.
L3_072_000M1_scaffold_99_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23396..26428)
DNA (3033bp) protein (1011aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=root RepID=B0MVN6_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS04100.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Outer membrane receptor proteins, mostly Fe transport
L3_072_000M1_scaffold_99_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26757..27941
DNA (1185bp) protein (395aa)
Metallo-beta-lactamase domain protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JR12_9BACT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDE65242.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
flavoprotein
L3_072_000M1_scaffold_99_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28046..28495)
DNA (450bp) protein (150aa)
YhcH/YjgK/YiaL family protein n=2 Tax=Alistipes RepID=B0MVK4_9BACT
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:CDE65244.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_99_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28504..29661)
DNA (1158bp) protein (386aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=root RepID=B0MVK3_9BACT
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDS04097.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Metal-dependent hydrolase
L3_072_000M1_scaffold_99_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29665..30306)
DNA (642bp) protein (214aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDS04096.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDS04096.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Peptidase, S54 family n=3 Tax=root RepID=B0MVK2_9BACT
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_072_000M1_scaffold_99_26
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30362..32251)
DNA (1890bp) protein (630aa)
DNA mismatch repair protein MutL n=2 Tax=root RepID=B0MVK1_9BACT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA mismatch repair protein MutL
L3_072_000M1_scaffold_99_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32251..32640)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04094.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_072_000M1_scaffold_99_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32874..34037)
DNA (1164bp) protein (388aa)
Chaperone protein DnaJ n=4 Tax=root RepID=B0MVJ8_9BACT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
chaperone protein DnaJ
L3_072_000M1_scaffold_99_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34164..34784)
DNA (621bp) protein (207aa)
Protein GrpE n=3 Tax=root RepID=B0MVJ7_9BACT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
molecular chaperone GrpE
L3_072_000M1_scaffold_99_30

Not on your lists

comp(34850..35584)
DNA (735bp) protein (245aa)
Tetrapyrrole methylase family protein n=3 Tax=root RepID=K1TXL6_9ZZZZ
Tetrapyrrole methylase family protein {ECO:0000313|EMBL:EKC63971.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
methyltransferase
Displaying items 1-30 of 79 in total

View Taxonomy