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L3_072_000M1_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_168_1
unknown

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comp(2..163)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030E9569
L3_072_000M1_scaffold_168_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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361..1044
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000311ACC8
Uncharacterized protein {ECO:0000313|EMBL:EDM97820.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative DNA alkylation repair enzyme
L3_072_000M1_scaffold_168_3
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1058..1492
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000303B8AB
Transcriptional regulator {ECO:0000313|EMBL:KHE42056.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
transcriptional regulator
L3_072_000M1_scaffold_168_4

Not on your lists

1686..1949
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EC7C70
Uncharacterized protein {ECO:0000313|EMBL:EKC62162.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_072_000M1_scaffold_168_5
unknown

Not on your lists

1965..2378
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F422C2
L3_072_000M1_scaffold_168_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2447..4792
DNA (2346bp) protein (782aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003679883
outer membrane receptor for ferrienterochelin and colicins
TonB-dependent receptor {ECO:0000313|EMBL:EFR56593.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_072_000M1_scaffold_168_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4948..5385
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EE5ABF
Heavy metal-associated domain protein {ECO:0000313|EMBL:CCZ97329.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
copper chaperone
L3_072_000M1_scaffold_168_8
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5487..7268)
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003184262
Uncharacterized protein {ECO:0000313|EMBL:CDC65118.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
hypothetical protein
L3_072_000M1_scaffold_168_9
unknown

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comp(7265..7387)
DNA (123bp) protein (41aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003184262
L3_072_000M1_scaffold_168_10
unknown

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7480..7821
DNA (342bp) protein (114aa)

This feature has no annotations

L3_072_000M1_scaffold_168_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7751..8461)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F931F4
Zn-dependent hydrolase
Putative Zn-dependent hydrolase of beta-lactamase fold protein {ECO:0000313|EMBL:AFL76517.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_168_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8696..9559)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003798174
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65281.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_168_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9884..11803
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F2C25E
RecQ familyATP-dependent DNA helicase
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:AFL76522.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_168_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11829..12431
DNA (603bp) protein (201aa)
3'-5' exonuclease {ECO:0000313|EMBL:EDS04253.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS04253.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000305A03F
Ribonuclease D
L3_072_000M1_scaffold_168_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12428..13630
DNA (1203bp) protein (401aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DECC1D
Uncharacterized protein {ECO:0000313|EMBL:CDE64493.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_072_000M1_scaffold_168_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13620..14138
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FAC27D
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:CDE64490.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_168_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14224..15399)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003131005
Uncharacterized protein {ECO:0000313|EMBL:CCZ96457.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_072_000M1_scaffold_168_18
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15410..16600)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E68690
Uncharacterized flavoproteins {ECO:0000313|EMBL:CDC98315.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Uncharacterized flavoproteins
L3_072_000M1_scaffold_168_19
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16647..17759)
DNA (1113bp) protein (371aa)
peptide chain release factor 2 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037F6C0A
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
bacterial peptide chain release factor 2 (bRF-2)
L3_072_000M1_scaffold_168_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18243..18848
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003051F4A
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
RNA polymerase sigma factor sigma-70 family/RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ96342.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_168_21
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18950..19915
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003032530
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor membrane component {ECO:0000313|EMBL:CCZ96343.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_168_22
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20001..23333
DNA (3333bp) protein (1111aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000376D779
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDD19177.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
hypothetical protein
L3_072_000M1_scaffold_168_23
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23350..25230
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037C93B1
Outer membrane protein {ECO:0000313|EMBL:CDD19175.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
SusD family outer membrane protein
L3_072_000M1_scaffold_168_24
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25253..26569
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F00EB4
F5/8 type C domain protein {ECO:0000313|EMBL:EEZ24774.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_072_000M1_scaffold_168_25
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26566..28005
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000381A36E
Uncharacterized protein {ECO:0000313|EMBL:EFV30802.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
hypothetical protein
L3_072_000M1_scaffold_168_26
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28204..29814
DNA (1611bp) protein (537aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EEC0AB
alpha-galactosidase
L3_072_000M1_scaffold_168_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29900..31846)
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003109507
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
membrane protein insertase
L3_072_000M1_scaffold_168_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31871..33490)
DNA (1620bp) protein (540aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
CTP synthase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D3E5CB
L3_072_000M1_scaffold_168_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33593..35731)
DNA (2139bp) protein (713aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000360C2A2
Uncharacterized protein {ECO:0000313|EMBL:CDD24870.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_072_000M1_scaffold_168_30
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35943..36611
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003646972
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:CCZ77386.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Displaying items 1-30 of 71 in total

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