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L3_072_000M1_scaffold_227

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_227_1
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..113
DNA (111bp) protein (37aa)
Segregation and condensation protein B n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W5E3_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_227_2
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110..730
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01945.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_227_3
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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727..1227
DNA (501bp) protein (167aa)
Sporulation protein YtfJ n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W5D7_9FIRM
Sporulation protein YtfJ {ECO:0000313|EMBL:CDD01944.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
sporulation protein YtfJ
L3_072_000M1_scaffold_227_4
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1295..2149
DNA (855bp) protein (285aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X647_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDD01942.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
D-alanyl-D-alanine carboxypeptidase
L3_072_000M1_scaffold_227_5
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2160..2867
DNA (708bp) protein (236aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
rsuB; pseudouridine synthase RsuB (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXQ1_9FIRM
L3_072_000M1_scaffold_227_6
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2864..3163
DNA (300bp) protein (100aa)
Predicted RNA-binding protein containing KH domain n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X642_9FIRM
Predicted RNA-binding protein containing KH domain {ECO:0000313|EMBL:CDD01937.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
RNA-binding protein
L3_072_000M1_scaffold_227_7
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3168..4328
DNA (1161bp) protein (387aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXP6_9FIRM
hypothetical protein
L3_072_000M1_scaffold_227_8
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4334..4687
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VTB1_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
iojap-like protein
L3_072_000M1_scaffold_227_9
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4726..7128
DNA (2403bp) protein (801aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X637_9FIRM
L3_072_000M1_scaffold_227_10
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7147..7533
DNA (387bp) protein (129aa)
Large-conductance mechanosensitive channel n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WCM7_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
mscL; large-conductance mechanosensitive channel
L3_072_000M1_scaffold_227_11
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7530..8417
DNA (888bp) protein (296aa)
Predicted N-acetylglucosamine kinase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXP1_9FIRM
Predicted N-acetylglucosamine kinase {ECO:0000313|EMBL:CDD01930.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Predicted N-acetylglucosamine kinase
L3_072_000M1_scaffold_227_12
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8419..10158
DNA (1740bp) protein (580aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W5C3_9FIRM
L3_072_000M1_scaffold_227_13
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10297..11562)
DNA (1266bp) protein (422aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VTA5_9FIRM
L3_072_000M1_scaffold_227_14
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11582..13189)
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X633_9FIRM
L3_072_000M1_scaffold_227_15
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13202..13786)
DNA (585bp) protein (195aa)
Putative ANTAR domain protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXN5_9FIRM
Putative ANTAR domain protein {ECO:0000313|EMBL:CDD01925.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
response regulator with putative antiterminator output domain
L3_072_000M1_scaffold_227_16
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13820..15028)
DNA (1209bp) protein (403aa)
Glutamate--ammonia ligase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VTA2_9FIRM
Glutamate--ammonia ligase {ECO:0000313|EMBL:CDD01923.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_227_17
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15054..15773)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WCL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01921.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
GltB; glutamate synthase domain 3
L3_072_000M1_scaffold_227_18
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15776..17023)
DNA (1248bp) protein (416aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXN2_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDD01920.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_072_000M1_scaffold_227_19
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17020..17448)
DNA (429bp) protein (143aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VT96_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDD01918.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_227_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17445..18950)
DNA (1506bp) protein (502aa)
glutamate synthase (NADPH) GltB2 subunit (EC:1.4.1.14 1.4.1.13)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z2N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58349.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_072_000M1_scaffold_227_21
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18950..20041)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01910.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
GltB; glutamate synthase domain 1
L3_072_000M1_scaffold_227_22
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20256..22514
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W5A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01909.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_227_23
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22535..24112
DNA (1578bp) protein (526aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VT90_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CDD01908.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_227_24
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24326..24781
DNA (456bp) protein (152aa)
Transcriptional regulator MerR family n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X614_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDD01907.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
transcriptional regulator
L3_072_000M1_scaffold_227_25
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24785..25909
DNA (1125bp) protein (375aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXL9_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD01905.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
putative metallophosphoesterase
L3_072_000M1_scaffold_227_26
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25913..26356
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VT86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01903.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_072_000M1_scaffold_227_27
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26411..26551
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X608_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01902.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_227_28
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26690..27745
DNA (1056bp) protein (352aa)
Oxidoreductase domain protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VXL6_9FIRM
Oxidoreductase domain protein {ECO:0000313|EMBL:CDD01900.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
oxidoreductase domain protein
L3_072_000M1_scaffold_227_29
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27792..30296
DNA (2505bp) protein (835aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VT82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01898.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_072_000M1_scaffold_227_30
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30424..31134
DNA (711bp) protein (237aa)
Nucleotide-binding protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X603_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDD01897.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
ATPases involved in chromosome partitioning
Displaying items 1-30 of 65 in total

View Taxonomy