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L3_072_000M1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_232_1
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(217..1014)
DNA (798bp) protein (266aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
glutamate racemase (EC:5.1.1.3)
glutamate racemase n=1 Tax=Alistipes senegalensis RepID=UPI0002D5108F
L3_072_000M1_scaffold_232_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1028..1555)
DNA (528bp) protein (176aa)
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
shikimate kinase n=1 Tax=Alistipes senegalensis RepID=UPI000301030A
L3_072_000M1_scaffold_232_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1569..4433)
DNA (2865bp) protein (955aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3 5.99.1.-)
DNA topoisomerase IV subunit A n=1 Tax=Alistipes senegalensis RepID=UPI0003101E60
DNA topoisomerase IV subunit A {ECO:0000313|EMBL:CCZ97667.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_232_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4461..6332)
DNA (1872bp) protein (624aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit {ECO:0000313|EMBL:CBK62954.1}; EC=5.99.1.- {ECO:0000313|EMBL:CBK62954.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.-)
DNA topoisomerase IV subunit B n=1 Tax=Alistipes senegalensis RepID=UPI000302D4BD
L3_072_000M1_scaffold_232_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6339..7061)
DNA (723bp) protein (241aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI00037350AB
L3_072_000M1_scaffold_232_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7342..9702
DNA (2361bp) protein (787aa)
TonB-denpendent receptor n=1 Tax=Alistipes senegalensis RepID=UPI0002E9DD69
Uncharacterized protein {ECO:0000313|EMBL:CCZ97754.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_072_000M1_scaffold_232_7
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9770..10759)
DNA (990bp) protein (330aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI000316E244
Putative membrane protein {ECO:0000313|EMBL:CDC98072.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
permease, DMT superfamily
L3_072_000M1_scaffold_232_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10760..11335)
DNA (576bp) protein (192aa)
LemA family protein n=1 Tax=Alistipes senegalensis RepID=UPI0003014DEF
hypothetical protein
LemA family protein {ECO:0000313|EMBL:EFR58762.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_072_000M1_scaffold_232_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11356..12252)
DNA (897bp) protein (299aa)
methanol dehydrogenase n=1 Tax=Alistipes senegalensis RepID=UPI0003634BE2
Beta-propeller domain-containing protein methanol dehydrogenase {ECO:0000313|EMBL:CCZ76553.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
methanol dehydrogenase
L3_072_000M1_scaffold_232_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12385..13194)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000368B589
Uncharacterized protein {ECO:0000313|EMBL:EDS14432.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_072_000M1_scaffold_232_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13707..14552)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00030C1887
Uncharacterized protein {ECO:0000313|EMBL:EKN14247.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
G-D-S-L family lipolytic protein
L3_072_000M1_scaffold_232_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14577..15848)
DNA (1272bp) protein (424aa)
glycosidase n=1 Tax=Alistipes senegalensis RepID=UPI000360806B
Glycosidases {ECO:0000313|EMBL:CCZ95728.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Glycosidases
L3_072_000M1_scaffold_232_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15852..18140)
DNA (2289bp) protein (763aa)
maltose phosphorylase (EC:2.4.1.8 2.4.1.230)
Maltose phosphorylase {ECO:0000313|EMBL:CBK62951.1}; EC=2.4.1.230 {ECO:0000313|EMBL:CBK62951.1};; EC=2.4.1.8 {ECO:0000313|EMBL:CBK62951.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
maltose phosphorylase n=1 Tax=Alistipes senegalensis RepID=UPI0002DC2109
L3_072_000M1_scaffold_232_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18122..18778)
DNA (657bp) protein (219aa)
beta-phosphoglucomutase (EC:5.4.2.6)
Beta-phosphoglucomutase {ECO:0000313|EMBL:CBK62950.1}; EC=5.4.2.6 {ECO:0000313|EMBL:CBK62950.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
beta-phosphoglucomutase n=1 Tax=Alistipes senegalensis RepID=UPI0002F4A3F3
L3_072_000M1_scaffold_232_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18853..20430)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000380A670
Uncharacterized protein {ECO:0000313|EMBL:KKB58930.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L3_072_000M1_scaffold_232_16
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20540..21820)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6U3I6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC65397.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
hypothetical protein
L3_072_000M1_scaffold_232_17
unknown

Not on your lists

comp(21854..22069)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000303666B
L3_072_000M1_scaffold_232_18
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22081..23481)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F79795
SusD family {ECO:0000313|EMBL:CDD18259.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
RagB/SusD domain-containing protein
L3_072_000M1_scaffold_232_19
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23512..26829)
DNA (3318bp) protein (1106aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D8ED00
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDD18258.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_072_000M1_scaffold_232_20
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26870..29311)
DNA (2442bp) protein (814aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000375EBAB
Uncharacterized protein {ECO:0000313|EMBL:CDD90824.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
hypothetical protein
L3_072_000M1_scaffold_232_21
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29308..31890)
DNA (2583bp) protein (861aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S442_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL85728.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
hypothetical protein
L3_072_000M1_scaffold_232_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32187..33098)
DNA (912bp) protein (304aa)
nucleotidyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI0003669F26
Uncharacterized protein {ECO:0000313|EMBL:CCZ95734.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
dTDP-glucose pyrophosphorylase
L3_072_000M1_scaffold_232_23
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33231..34100
DNA (870bp) protein (290aa)
peptidase n=1 Tax=Alistipes senegalensis RepID=UPI000303D2DA
Membrane-bound metallopeptidase {ECO:0000313|EMBL:CCZ95735.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Membrane-bound metallopeptidase
L3_072_000M1_scaffold_232_24
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34108..35259
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Alistipes senegalensis RepID=UPI0002E38A26
L3_072_000M1_scaffold_232_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35273..36604
DNA (1332bp) protein (444aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
zinc metalloprotease n=1 Tax=Alistipes senegalensis RepID=UPI0002FAC55A
RIP metalloprotease RseP
L3_072_000M1_scaffold_232_26
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36794..37372
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002893DB1
RNA polymerase sigma-70 factor, Bacteroides expansion family 1
Tax=GWE2_Bacteroidetes_42_39_curated
L3_072_000M1_scaffold_232_27
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37495..38703
DNA (1209bp) protein (403aa)
anti-FecI sigma factor, FecR n=1 Tax=Alistipes sp. JC136 RepID=UPI0002898F64
anti-FecI sigma factor, FecR
Tax=GWE2_Bacteroidetes_42_39_curated
L3_072_000M1_scaffold_232_28
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38731..41571
DNA (2841bp) protein (947aa)
TonB-dependent receptor plug n=1 Tax=Alistipes sp. JC136 RepID=UPI000289503F
TonB-dependent receptor plug {ECO:0000313|EMBL:CCY38447.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
TonB-dependent receptor plug
L3_072_000M1_scaffold_232_29
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41584..42963
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289EE5B
Uncharacterized protein {ECO:0000313|EMBL:KHM44338.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L3_072_000M1_scaffold_232_30
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42979..46461
DNA (3483bp) protein (1161aa)
TonB-dependent receptor plug n=1 Tax=Alistipes sp. JC136 RepID=UPI00028863A0
TonB-dependent receptor plug {ECO:0000313|EMBL:CCY38447.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
TonB-dependent receptor plug
Displaying items 1-30 of 51 in total

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