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L3_072_000M1_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_233_1
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(148..447)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EY69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96249.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
A disintegrin and metalloproteinase with thrombospondin motifs 20
L3_072_000M1_scaffold_233_2
unknown

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584..790
DNA (207bp) protein (69aa)

This feature has no annotations

L3_072_000M1_scaffold_233_3
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(884..1957)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EUL1_9BACE
mobilization protein
Mobilization protein {ECO:0000313|EMBL:AHF13321.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_072_000M1_scaffold_233_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1957..2331)
DNA (375bp) protein (125aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HUW9_BACUN
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOS07709.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
excisionase
L3_072_000M1_scaffold_233_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2433..3275)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I2Y6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07710.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
membrane protein
L3_072_000M1_scaffold_233_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3443..4507)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HV67_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS07711.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
integrase
L3_072_000M1_scaffold_233_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4676..5554)
DNA (879bp) protein (293aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HUN5_BACUN
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOS07712.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
transcriptional regulator
L3_072_000M1_scaffold_233_8
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5825..7180)
DNA (1356bp) protein (452aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
tRNA modification GTPase TrmE n=1 Tax=Alistipes senegalensis RepID=UPI0002D6DB6C
tRNA modification GTPase trmE
L3_072_000M1_scaffold_233_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7185..8564)
DNA (1380bp) protein (460aa)
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (EC:3.2.1.-)
lytic transglycosylase n=1 Tax=Alistipes senegalensis RepID=UPI0002FA4590
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) {ECO:0000313|EMBL:CCZ97173.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_233_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8568..9737)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FA6B87
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64687.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_233_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9746..10615)
DNA (870bp) protein (290aa)
chromosome partitioning protein ParB n=1 Tax=Alistipes senegalensis RepID=UPI000318A362
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBK64688.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_233_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10626..11396)
DNA (771bp) protein (257aa)
chromosome partitioning protein ParA n=1 Tax=Alistipes senegalensis RepID=UPI0003630FE3
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:CBK64689.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_233_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11511..12407
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002DF232E
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CCZ97177.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
metal-dependent membrane protease
L3_072_000M1_scaffold_233_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12466..13353
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00036EAE1F
Uncharacterized protein {ECO:0000313|EMBL:CCZ97178.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_072_000M1_scaffold_233_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13379..14785
DNA (1407bp) protein (469aa)
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:CBK64690.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Alistipes senegalensis RepID=UPI00030EDDE3
L3_072_000M1_scaffold_233_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14789..17218
DNA (2430bp) protein (810aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000367B9F2
Uncharacterized protein {ECO:0000313|EMBL:CCZ97180.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_072_000M1_scaffold_233_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17307..18464
DNA (1158bp) protein (386aa)
MFS transporter n=1 Tax=Alistipes senegalensis RepID=UPI000362679E
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:CBK64691.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_233_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18451..18951
DNA (501bp) protein (167aa)
NTP pyrophosphohydrolase n=1 Tax=Alistipes senegalensis RepID=UPI0002EF2D27
Isopentenyldiphosphate isomerase
Isopentenyldiphosphate isomerase {ECO:0000313|EMBL:CCZ97182.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_072_000M1_scaffold_233_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19005..20366
DNA (1362bp) protein (454aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI00036B3F0E
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CCZ97183.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Small-conductance mechanosensitive channel
L3_072_000M1_scaffold_233_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20335..22092)
DNA (1758bp) protein (586aa)
transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002E57E4A
Predicted permease
Predicted permease {ECO:0000313|EMBL:CBK64694.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_233_21
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22364..23722)
DNA (1359bp) protein (453aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI0002DB7861
Outer membrane protein {ECO:0000313|EMBL:CDC95855.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
outer membrane protein
L3_072_000M1_scaffold_233_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23738..24850)
DNA (1113bp) protein (371aa)
RND transporter MFP subunit n=1 Tax=Alistipes senegalensis RepID=UPI000302B3C3
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AFL76895.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_233_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24897..26156)
DNA (1260bp) protein (420aa)
antimicrobial peptide ABC transporter permease n=1 Tax=Alistipes senegalensis RepID=UPI00031613D4
ABC-type antimicrobial peptide transport system permease component {ECO:0000313|EMBL:CDD25688.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter permease
L3_072_000M1_scaffold_233_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26332..27591)
DNA (1260bp) protein (420aa)
antimicrobial peptide ABC transporter permease n=1 Tax=Alistipes senegalensis RepID=UPI000319E451
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD25689.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter permease
L3_072_000M1_scaffold_233_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27588..28277)
DNA (690bp) protein (230aa)
ABC transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002DE1ADD
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDD25690.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter ATPase
L3_072_000M1_scaffold_233_26
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28417..29091)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000318FFBB
HAD hydrolase family IA variant 1 {ECO:0000313|EMBL:CDC95664.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phosphatase
L3_072_000M1_scaffold_233_27
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29133..30428)
DNA (1296bp) protein (432aa)
4-hydroxybutyrate CoA transferase n=1 Tax=Alistipes senegalensis RepID=UPI0002D389F8
Acetyl-CoA hydrolase {ECO:0000313|EMBL:CCZ97186.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Acetyl-CoA hydrolase
L3_072_000M1_scaffold_233_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30437..31747)
DNA (1311bp) protein (437aa)
aminotransferase n=1 Tax=Alistipes senegalensis RepID=UPI0003780D1A
Aspartate/tyrosine/aromatic aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CBK64698.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_233_29
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31744..32331)
DNA (588bp) protein (196aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
indolepyruvate oxidoreductase n=1 Tax=Alistipes senegalensis RepID=UPI0002F2103A
Putative indolepyruvate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CDC95660.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L3_072_000M1_scaffold_233_30
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32328..33935)
DNA (1608bp) protein (536aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
indolepyruvate ferredoxin oxidoreductase n=1 Tax=Alistipes senegalensis RepID=UPI0002D4CDD6
indolepyruvate ferredoxin oxidreductase subunit alpha/beta
Displaying items 1-30 of 53 in total

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