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L3_072_000M1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_239_1
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(498..1487)
DNA (990bp) protein (330aa)
PA14 domain-containing protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G453_9FIRM
PA14 domain-containing protein {ECO:0000313|EMBL:CCY07697.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L3_072_000M1_scaffold_239_2
unknown

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1876..4269
DNA (2394bp) protein (798aa)

This feature has no annotations

L3_072_000M1_scaffold_239_3
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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4340..5449
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XKR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD22170.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
endonuclease
L3_072_000M1_scaffold_239_4
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

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5633..6199
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GKH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25988.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
L3_072_000M1_scaffold_239_5
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6268..6813)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B2E756
DNA integration/recombination/invertion protein
DNA integration/recombination/invertion protein {ECO:0000313|EMBL:CDZ74675.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_072_000M1_scaffold_239_6
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6788..7396)
DNA (609bp) protein (203aa)
Thymidine kinase {ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|RuleBase:RU000544};; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5WRY4_9DELT
L3_072_000M1_scaffold_239_7
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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7552..8655
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IMR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23195.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Listeria/Bacterioides repeat
L3_072_000M1_scaffold_239_8
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8655..10052
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D132_PREDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGQ16711.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
L3_072_000M1_scaffold_239_9
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10171..10656
DNA (486bp) protein (162aa)
NADH-quinone oxidoreductase E subunit n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q4W2_9CLOT
NAD-reducing hydrogenase subunit HoxE {ECO:0000313|EMBL:GAE88231.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
NADH-quinone oxidoreductase subunit E
L3_072_000M1_scaffold_239_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10666..12528
DNA (1863bp) protein (621aa)
4Fe-4S binding domain protein n=2 Tax=Clostridium RepID=R6N3J8_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDC05610.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative [Fe] hydrogenase, electron-transfer subunit
L3_072_000M1_scaffold_239_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12531..14222
DNA (1692bp) protein (564aa)
Hydrogenase, Fe-only n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I631_CLOCE
Ferredoxin {ECO:0000313|EMBL:KGG79558.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hydrogenase, Fe-only
L3_072_000M1_scaffold_239_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14241..14615
DNA (375bp) protein (125aa)
Desulfoferrodoxin ferrous iron-binding domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DI85_CLODI
Desulfoferrodoxin ferrous iron-binding domain protein {ECO:0000313|EMBL:EQF26552.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
desulfoferrodoxin ferrous iron-binding domain
L3_072_000M1_scaffold_239_13
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14712..15143
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VV24_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCZ94723.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L3_072_000M1_scaffold_239_14
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15796..16854
DNA (1059bp) protein (353aa)
Putative fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FQN0_9CLOT
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDE16027.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
IgA Peptidase M64./Fibronectin type III domain.
L3_072_000M1_scaffold_239_15
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16960..17616
DNA (657bp) protein (219aa)
Putative fibronectin type III domain protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DNV5_9FIRM
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDA89300.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
IgA Peptidase M64./Fibronectin type III domain.
L3_072_000M1_scaffold_239_16
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17681..17974
DNA (294bp) protein (98aa)
Putative fibronectin type III domain protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DNV5_9FIRM
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDA89300.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
IgA Peptidase M64./Fibronectin type III domain.
L3_072_000M1_scaffold_239_17
Mycoplasma sp. CAG:877, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(18163..18984)
DNA (822bp) protein (274aa)
Acetyltransferase n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5M2M3_9MOLU
Acetyltransferase {ECO:0000313|EMBL:CCY79506.1}; TaxID=1262907 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:877.;"
L3_072_000M1_scaffold_239_18
Firmicutes bacterium CAG:552, Firmicutes, Bacteria

Not on your lists

19049..19690
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:552 RepID=R6GKZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25110.1}; TaxID=1263029 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:552.;"
L3_072_000M1_scaffold_239_19
unknown

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comp(20063..20629)
DNA (567bp) protein (189aa)

This feature has no annotations

L3_072_000M1_scaffold_239_20
unknown

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21350..21907
DNA (558bp) protein (186aa)

This feature has no annotations

L3_072_000M1_scaffold_239_21
unknown

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21923..22435
DNA (513bp) protein (171aa)

This feature has no annotations

L3_072_000M1_scaffold_239_22
unknown

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22476..23519
DNA (1044bp) protein (348aa)

This feature has no annotations

L3_072_000M1_scaffold_239_23
Clostridium sp. CAG:433, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23673..24506
DNA (834bp) protein (278aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Clostridium sp. CAG:433 RepID=R6ZBH7_9CLOT
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:CDD27832.1}; TaxID=1262806 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:433.;"
ADP-ribosylglycohydrolase
L3_072_000M1_scaffold_239_24
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24682..25713
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNT0_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41681.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_072_000M1_scaffold_239_25
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25764..27197)
DNA (1434bp) protein (478aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:452 RepID=R6XYE9_9CLOT
nicotinate phosphoribosyltransferase
L3_072_000M1_scaffold_239_26
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27418..28170
DNA (753bp) protein (251aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|RuleBase:RU003812, ECO:0000256|SAAS:SAAS00094448}; EC=6.3.1.5 {ECO:0000256|RuleBase:RU003812, ECO:0000256|SAAS:SAAS00094492};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
nadE; putative NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Clostridium intestinale URNW RepID=U2NM54_9CLOT
L3_072_000M1_scaffold_239_27
unknown

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28180..28659
DNA (480bp) protein (160aa)

This feature has no annotations

L3_072_000M1_scaffold_239_28
unknown

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28732..29436
DNA (705bp) protein (235aa)
signal peptidase I (EC:3.4.21.89)
L3_072_000M1_scaffold_239_29
unknown

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29452..30915
DNA (1464bp) protein (488aa)

This feature has no annotations

L3_072_000M1_scaffold_239_30
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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31062..32102
DNA (1041bp) protein (347aa)
Peptide chain release factor 2 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FVB2_9PROT
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
peptide chain release factor 2
Displaying items 1-30 of 62 in total

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