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L3_072_000M1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_247_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1393)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4Q0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14099.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
oxidoreductase
L3_072_000M1_scaffold_247_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1730..1879)
DNA (150bp) protein (50aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BL15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14098.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_247_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2060..4204
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 PF4_9PORP">RepID=K5ZPF4_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:EDN87713.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_247_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4654..4881)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7ABS9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13130.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_247_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5249..5701
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AZ17_9PORP
Putative DNA-binding protein {ECO:0000313|EMBL:CDD13131.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_247_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5798..5905
DNA (108bp) protein (36aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7ABS5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87708.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000M1_scaffold_247_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5925..6356
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BL11_9PORP
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDN87707.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
N-acetylmuramoyl-L-alanine amidase
L3_072_000M1_scaffold_247_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6419..8302)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZH65_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10756.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
starch-binding protein
L3_072_000M1_scaffold_247_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8327..11467)
DNA (3141bp) protein (1047aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZP65_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN13281.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
collagen-binding protein
L3_072_000M1_scaffold_247_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11582..11734
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSY3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14468.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_072_000M1_scaffold_247_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11988..13904
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=3 Tax=Parabacteroides RepID=A7ABL6_9PORP
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dnaK; molecular chaperone DnaK
L3_072_000M1_scaffold_247_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13998..14780)
DNA (783bp) protein (261aa)
Hydrolase carbon-nitrogen family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYU5_9PORP
Hydrolase carbon-nitrogen family {ECO:0000313|EMBL:CDD14470.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
amidohydrolase
L3_072_000M1_scaffold_247_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14785..15330)
DNA (546bp) protein (182aa)
Acyltransferase n=4 Tax=Parabacteroides RepID=A7ABL4_9PORP
Acyltransferase {ECO:0000313|EMBL:EDN87647.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acyltransferase
L3_072_000M1_scaffold_247_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15341..15625)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ABL3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14472.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_247_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15753..17411
DNA (1659bp) protein (553aa)
Starch synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSY8_9PORP
Starch synthase {ECO:0000313|EMBL:CDD14473.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase family alpha-glycosyltransferase
L3_072_000M1_scaffold_247_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17519..20089
DNA (2571bp) protein (857aa)
Alpha-glucan phosphorylase n=3 Tax=Parabacteroides RepID=A7ABL1_9PORP
Alpha-glucan phosphorylase {ECO:0000313|EMBL:CDD14474.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase family alpha-glucan phosphorylase
L3_072_000M1_scaffold_247_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20331..21713)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z5F4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87643.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein
L3_072_000M1_scaffold_247_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21769..22611
DNA (843bp) protein (281aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7W0_9PORP
aluminum resistance protein
L3_072_000M1_scaffold_247_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22644..23111
DNA (468bp) protein (156aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=2 Tax=Parabacteroides merdae RepID=A7ABK8_9PORP
7-cyano-7-deazaguanine reductase
L3_072_000M1_scaffold_247_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23306..24085
DNA (780bp) protein (260aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A7ABK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87640.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_247_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24174..25994)
DNA (1821bp) protein (607aa)
DNA polymerase III, subunit gamma and tau n=2 Tax=Parabacteroides merdae RepID=A7ABK6_9PORP
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDN87639.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA polymerase III subunit gamma/tau
L3_072_000M1_scaffold_247_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26066..26371
DNA (306bp) protein (102aa)
Septum formation initiator n=4 Tax=Parabacteroides RepID=A7ABK5_9PORP
Septum formation initiator {ECO:0000313|EMBL:CDD14481.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
septum formation initiator-like protein
L3_072_000M1_scaffold_247_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26372..26701
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7W4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14482.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_247_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26849..29227
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YBP2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10767.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-linked outer membrane receptor
L3_072_000M1_scaffold_247_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29271..30674
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5U0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14484.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_072_000M1_scaffold_247_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30671..31798
DNA (1128bp) protein (376aa)
PepSY domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYW4_9PORP
PepSY domain protein {ECO:0000313|EMBL:CDD14485.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
iron uptake factor
L3_072_000M1_scaffold_247_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31995..32597)
DNA (603bp) protein (201aa)
Outer membrane protein n=4 Tax=Parabacteroides RepID=A7ABJ9_9PORP
Outer membrane protein {ECO:0000313|EMBL:EDN87632.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_247_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32626..32844)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ABJ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87631.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_072_000M1_scaffold_247_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32992..34449
DNA (1458bp) protein (486aa)
Xaa-His dipeptidase n=3 Tax=Parabacteroides RepID=A7ABJ7_9PORP
Xaa-His dipeptidase {ECO:0000313|EMBL:EDN87630.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aminoacyl-histidine dipeptidase
L3_072_000M1_scaffold_247_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34608..36071
DNA (1464bp) protein (488aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ABJ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87629.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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