ggKbase home page

L3_072_000M1_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_258_1
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..158)
DNA (156bp) protein (52aa)
Glycerol-3-phosphate transporter n=2 Tax=Bacteroidales RepID=K0XBL3_9PORP
Glycerol-3-phosphate transporter {ECO:0000313|EMBL:EJZ65184.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
glpT; glycerol-3-phosphate transporter
L3_072_000M1_scaffold_258_2
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(181..1749)
DNA (1569bp) protein (523aa)
glpD; GlpD protein (EC:1.1.5.3)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F486_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95562.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_072_000M1_scaffold_258_3
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1922..2743
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X417_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95563.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
DeoR family transcriptional regulator
L3_072_000M1_scaffold_258_4
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2892..3692)
DNA (801bp) protein (267aa)
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=2 Tax=Bacteroidales RepID=K0X1E4_9PORP
Rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:EJZ65193.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_072_000M1_scaffold_258_5
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3706..4743)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XBM0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ65194.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
rhamnose-proton symporter
L3_072_000M1_scaffold_258_6
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4750..6009)
DNA (1260bp) protein (420aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=2 Tax=Bacteroidales RepID=K0XMX4_9PORP
L3_072_000M1_scaffold_258_7
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6027..7508)
DNA (1482bp) protein (494aa)
Rhamnulokinase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X425_9PORP
Rhamnulokinase {ECO:0000313|EMBL:EJZ65196.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
carbohydrate kinase, FGGY family protein
L3_072_000M1_scaffold_258_8
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7636..8529
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=root RepID=K0X119_9PORP
Transcriptional regulator {ECO:0000313|EMBL:CCX95574.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
transcriptional regulator
L3_072_000M1_scaffold_258_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8704..10428
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95575.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
endonuclease
L3_072_000M1_scaffold_258_10
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10534..11340)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XBM3_9PORP
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
polyphenol oxidase
L3_072_000M1_scaffold_258_11
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11340..12473)
DNA (1134bp) protein (378aa)
GTPase Obg n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XMX8_9PORP
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
GTPase CgtA
L3_072_000M1_scaffold_258_12
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12786..14822
DNA (2037bp) protein (679aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X429_9PORP
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:EJZ65201.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L3_072_000M1_scaffold_258_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15305..15877)
DNA (573bp) protein (191aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Adenylate kinase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESD9_9BACE
adenylate kinase
L3_072_000M1_scaffold_258_14
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15913..16452)
DNA (540bp) protein (180aa)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Bacteroidales RepID=K0X1F0_9PORP
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EJZ65203.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypoxanthine phosphoribosyltransferase
L3_072_000M1_scaffold_258_15
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16696..18225
DNA (1530bp) protein (510aa)
YjeF family domain-containing protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XBM8_9PORP
YjeF family domain-containing protein {ECO:0000313|EMBL:EJZ65204.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
sugar kinase
L3_072_000M1_scaffold_258_16
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18354..19421
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESR7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95583.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_258_17
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19372..20019
DNA (648bp) protein (216aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Ribonuclease HII n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X436_9PORP
ribonuclease HII
L3_072_000M1_scaffold_258_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20094..22988)
DNA (2895bp) protein (965aa)
Fibronectin type III domain protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESE1_9BACE
Fibronectin type III domain protein {ECO:0000313|EMBL:CCX95585.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_258_19
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23153..24541)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F5V7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95586.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_072_000M1_scaffold_258_20
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24699..26258)
DNA (1560bp) protein (520aa)
Amino acid/peptide transporter (Peptide:H+ symporter) n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X127_9PORP
Amino acid/peptide transporter (Peptide:H+ symporter) {ECO:0000313|EMBL:EJZ65207.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
symporter
L3_072_000M1_scaffold_258_21
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26286..26711)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X1F4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95588.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Fe-S metabolism protein SufE
L3_072_000M1_scaffold_258_22
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26728..27720)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95589.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
glutamine cyclotransferase
L3_072_000M1_scaffold_258_23
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27764..28669)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95590.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
peptidase U61
L3_072_000M1_scaffold_258_24
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28669..29283)
DNA (615bp) protein (205aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X443_9PORP
peptidase M15D
L3_072_000M1_scaffold_258_25
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29277..30452)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4B1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95592.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_072_000M1_scaffold_258_26
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30585..31898)
DNA (1314bp) protein (438aa)
GTPase Der n=2 Tax=Bacteroidales RepID=K0X1F6_9PORP
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
GTP-binding protein Der
L3_072_000M1_scaffold_258_27
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31947..32831)
DNA (885bp) protein (295aa)
GTPase Era n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XBN4_9PORP
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
era; GTPase Era
L3_072_000M1_scaffold_258_28
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32989..33981)
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESE9_9BACE
3-oxoacyl-ACP synthase
L3_072_000M1_scaffold_258_29
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(34057..34242)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=2 Tax=Bacteroidales RepID=K0X451_9PORP
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
50S ribosomal protein L32
L3_072_000M1_scaffold_258_30
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34255..34803)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4B5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95597.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
Displaying items 1-30 of 46 in total

View Taxonomy