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L3_072_000M1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_281_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(159..812)
DNA (654bp) protein (218aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035D2BF4
Holliday junction DNA helicase subunit RuvA
L3_072_000M1_scaffold_281_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

868..1449
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F90823
Outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:CBK62923.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_281_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1562..2332
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030B9001
conserved hypothetical protein TIGR00159
Uncharacterized protein {ECO:0000313|EMBL:CBK62922.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_281_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2479..3117
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F2014C
Uncharacterized protein {ECO:0000313|EMBL:CDE63196.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_281_5
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3133..4728
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000375022D
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L3_072_000M1_scaffold_281_6
unknown

Not on your lists

comp(4707..5285)
DNA (579bp) protein (193aa)

This feature has no annotations

L3_072_000M1_scaffold_281_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5254..5496)
DNA (243bp) protein (81aa)
DNA-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003690425
Uncharacterized protein {ECO:0000313|EMBL:CDE63194.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_072_000M1_scaffold_281_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5984..7918
DNA (1935bp) protein (645aa)
molecular chaperone DnaK n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003688FFD
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
chaperone protein DnaK
L3_072_000M1_scaffold_281_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8470..11484
DNA (3015bp) protein (1005aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DFA433
SecD/SecF family protein-export membrane protein
Protein-export membrane protein, SecD/SecF family {ECO:0000313|EMBL:AFL79099.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_281_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11800..12192
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003189ED5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79100.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_072_000M1_scaffold_281_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12189..12785
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Dephospho-CoA kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XR31_9BACT
dephospho-CoA kinase
L3_072_000M1_scaffold_281_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12736..13590
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000370155A
Dihydropteroate synthase {ECO:0000313|EMBL:CDE63189.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
dihydropteroate synthase
L3_072_000M1_scaffold_281_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13587..14258
DNA (672bp) protein (224aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031E8E56
L3_072_000M1_scaffold_281_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14261..15031
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035EFB19
conserved hypothetical protein TIGR02757
Uncharacterized protein {ECO:0000313|EMBL:CBK62935.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_072_000M1_scaffold_281_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15081..15734
DNA (654bp) protein (218aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D3433D
Predicted O-methyltransferase
L3_072_000M1_scaffold_281_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15784..16683
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037203D5
Uncharacterized protein {ECO:0000313|EMBL:CDD26157.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_072_000M1_scaffold_281_17
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16680..17327
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FCE68C
Putative DNA alkylation repair enzyme {ECO:0000313|EMBL:CDC95580.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Predicted DNA alkylation repair enzyme
L3_072_000M1_scaffold_281_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17412..18272)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036E2B2A
Uncharacterized protein {ECO:0000313|EMBL:EKN14550.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_281_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18454..19497
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036F3109
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDE64076.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
efflux transporter, RND family, MFP subunit
L3_072_000M1_scaffold_281_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19494..22619
DNA (3126bp) protein (1042aa)
multidrug transporter AcrB n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D46864
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDE64074.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
putative transport-related membrane protein
L3_072_000M1_scaffold_281_21
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22616..23956
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F104DA
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADV44074.1}; Flags: Precursor;; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L3_072_000M1_scaffold_281_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24017..25390)
DNA (1374bp) protein (458aa)
DNA repair protein RadA n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000305693A
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_072_000M1_scaffold_281_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25483..26805)
DNA (1323bp) protein (441aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F6B243
RIP metalloprotease RseP
L3_072_000M1_scaffold_281_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26816..27967)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035C8FAB
L3_072_000M1_scaffold_281_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27997..28941)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031DF930
Membrane-bound metallopeptidase {ECO:0000313|EMBL:CDD26148.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
membrane-bound metallopeptidase
L3_072_000M1_scaffold_281_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29501..29890)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F17B55
Uncharacterized protein {ECO:0000313|EMBL:CDD26146.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_072_000M1_scaffold_281_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29898..32399)
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D2994C
Chain length determinant protein {ECO:0000313|EMBL:EFR58697.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
capsular exopolysaccharide biosynthesis protein
L3_072_000M1_scaffold_281_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32416..33204)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003112872
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:EDS04387.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
polysaccharide export protein
L3_072_000M1_scaffold_281_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33355..34650
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F03375
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDS04388.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
glycosidase
L3_072_000M1_scaffold_281_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34755..35663
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003717C11
methanol dehydrogenase
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:AFL79121.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 45 in total

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